RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MAKP20794 623 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 ADRA1BP35368 520 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 KIF11P52732 1056 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 BPIFB4P59827 614 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 SLC6A3Q01959 620 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 MAP3K12Q12852 859 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 TCIRG1Q13488 830 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 EPHA7Q15375 998 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 ARHGAP44Q17R89 818 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 FAM111BQ6SJ93 734 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 UNQ6494/PRO21346Q6UXR6 183 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 EP400NLQ6ZTU2 488 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 BMP8AQ7Z5Y6 402 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 THEMISQ8N1K5 641 aaPredicted RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 ANKRD35Q8N283 1001 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 C2orf69Q8N8R5 385 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 ANKRD53Q8N9V6 530 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 CHST14Q8NCH0 376 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 NTN5Q8WTR8 489 aaPredicted RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 ERCC4Q92889 916 aaPredicted RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 GFM2Q969S9 779 aaKnown RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 MIEF2Q96C03 454 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 RPL10LQ96L21 214 aaKnown RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 IPO9Q96P70 1041 aaKnown RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 ORAI3Q9BRQ5 295 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 IL23AQ9NPF7 189 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 PARPBPQ9NWS1 579 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 KCMF1Q9P0J7 381 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 SAE1Q9UBE0 346 aaPredicted RBP2.65□□□□□ -1.99
CD44-212ENST00000524922 DENND2AQ9ULE3 1009 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 HS3ST4Q9Y661 456 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 CD109Q6YHK3 1445 aa2.65□□□□□ -1.99
CD44-212ENST00000524922 CBX4O00257 560 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 CYP27B1O15528 508 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 HIP1RO75146 1068 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 STC2O76061 302 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 TOX4O94842 621 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 ADH4P08319 380 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 VSIG10L2P0DP72 767 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 HNRNPLP14866 589 aaKnown RBP eCLIP2.64□□□□□ -1.99
CD44-212ENST00000524922 SDSP20132 328 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 GTF2F1P35269 517 aaKnown RBP eCLIP2.64□□□□□ -1.99
CD44-212ENST00000524922 SESN2P58004 480 aaPredicted RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 HHEXQ03014 270 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 ROM1Q03395 351 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 HNRNPA0Q13151 305 aaKnown RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 DGKDQ16760 1214 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 FNDC3BQ53EP0 1204 aaKnown RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 SLFN12LQ6IEE8 588 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 MRGPRGQ86SM5 289 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 CXorf67Q86X51 503 aaPredicted RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 PLA2G15Q8NCC3 412 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 MDGA1Q8NFP4 955 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 LENG9Q96B70 501 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 ELF4Q99607 663 aaPredicted RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 PRRX2Q99811 253 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 MLST8Q9BVC4 326 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 ZMAT4Q9H898 229 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 ACSS2Q9NR19 701 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 B4GALT6Q9UBX8 382 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 TNPO3Q9Y5L0 923 aaKnown RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 RBM8AQ9Y5S9 174 aaKnown RBP2.64□□□□□ -1.99
CD44-212ENST00000524922 REREQ9P2R6 1566 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 BCORL1Q5H9F3 1711 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 FANCAO15360 1455 aa2.64□□□□□ -1.99
CD44-212ENST00000524922 AKNAQ7Z591 1439 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 KIF27Q86VH2 1401 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 PTPDC1A2A3K4 754 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 GRID2IPA4D2P6 1211 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 E9PSI1 815 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 MTSS1O43312 755 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 H2AFYO75367 372 aaKnown RBP2.63□□□□□ -1.99
CD44-212ENST00000524922 MAN2A2P49641 1150 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 ELAVL1Q15717 326 aaKnown RBP2.63□□□□□ -1.99
CD44-212ENST00000524922 CSRP2Q16527 193 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 RABL3Q5HYI8 236 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 TTC38Q5R3I4 469 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 ELOA2Q8IYF1 753 aaPredicted RBP2.63□□□□□ -1.99
CD44-212ENST00000524922 KIAA1958Q8N8K9 716 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 DYDC2Q96IM9 177 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 ZNF512Q96ME7 567 aaPredicted RBP2.63□□□□□ -1.99
CD44-212ENST00000524922 WDR92Q96MX6 357 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 SRPK1Q96SB4 655 aaKnown RBP2.63□□□□□ -1.99
CD44-212ENST00000524922 MNTQ99583 582 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 POLR3BQ9NW08 1133 aaPredicted RBP2.63□□□□□ -1.99
CD44-212ENST00000524922 SAMD15Q9P1V8 674 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 DKK2Q9UBU2 259 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 DNAI1Q9UI46 699 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 GOLGA3Q08378 1498 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 PLA2R1Q13018 1463 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 COL4A3Q01955 1670 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 DISP1Q96F81 1524 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 ARHGEF12Q9NZN5 1544 aa2.63□□□□□ -1.99
CD44-212ENST00000524922 IQGAP2Q13576 1575 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 NPATQ14207 1427 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 SRCAPQ6ZRS2 3230 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 ABCA9Q8IUA7 1624 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 LTBP4Q8N2S1 1624 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 UBA6A0AVT1 1052 aaPredicted RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 AHRRA9YTQ3 701 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms