RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PIN4Q9Y237 131 aaKnown RBP13.26□□□□□ -0.29
SPARC-206ENST00000524277 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 CNTNAP2Q9UHC6 1331 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 TMEM221A6NGB7 291 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 C2orf71A6NGG8 1288 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 HIDE1A8MVS5 230 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 M0R296 226 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 SLC37A4O43826 429 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
SPARC-206ENST00000524277 CXCL14O95715 111 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 SIGLEC14Q08ET2 396 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 SCRN1Q12765 414 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 NOMO2Q5JPE7 1267 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 SYCE2Q6PIF2 218 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 DDX53Q86TM3 631 aaKnown RBP13.25□□□□□ -0.29
SPARC-206ENST00000524277 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 ADAM7Q9H2U9 754 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 DHX33Q9H6R0 707 aaKnown RBP13.25□□□□□ -0.29
SPARC-206ENST00000524277 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 DZANK1Q9NVP4 752 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 VAV3Q9UKW4 847 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 KCNJ14Q9UNX9 436 aa13.25□□□□□ -0.29
SPARC-206ENST00000524277 EML1O00423 815 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
SPARC-206ENST00000524277 MTHFRP42898 656 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 RNASELQ05823 741 aaKnown RBP13.24□□□□□ -0.29
SPARC-206ENST00000524277 NCBP1Q09161 790 aaKnown RBP13.24□□□□□ -0.29
SPARC-206ENST00000524277 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
SPARC-206ENST00000524277 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 SUGP1Q8IWZ8 645 aaKnown RBP13.24□□□□□ -0.29
SPARC-206ENST00000524277 VPS52Q8N1B4 723 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 URGCPQ8TCY9 931 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 FBXL18Q96ME1 805 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 RIPOR3Q96MK2 946 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 NLRP4Q96MN2 994 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 LARP6Q9BRS8 491 aaKnown RBP13.24□□□□□ -0.29
SPARC-206ENST00000524277 IFT122Q9HBG6 1241 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 AGPAT5Q9NUQ2 364 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 TRIOO75962 3097 aa13.24□□□□□ -0.29
SPARC-206ENST00000524277 TECTAO75443 2155 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 TMEM150BA6NC51 233 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 CLASP2O75122 1294 aaKnown RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 ZC3H11AO75152 810 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPARC-206ENST00000524277 OFD1O75665 1012 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 ALDH2P05091 517 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 NEFLP07196 543 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 GALTP07902 379 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 CTSAP10619 480 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 AXLP30530 894 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 PBX3P40426 434 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 RBM10P98175 930 aaKnown RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 PIK3AP1Q6ZUJ8 805 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 HAS1Q92839 578 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 CCDC51Q96ER9 411 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 FAM193BQ96PV7 902 aaPredicted RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 SH2D3AQ9BRG2 576 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 LXNQ9BS40 222 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 ZBP1Q9H171 429 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 IRF2BPLQ9H1B7 796 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 TBC1D13Q9NVG8 400 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
SPARC-206ENST00000524277 TPCN1Q9ULQ1 816 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 PCDHB2Q9Y5E7 798 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 HCFC2Q9Y5Z7 792 aa13.23□□□□□ -0.29
SPARC-206ENST00000524277 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 KRT2P35908 639 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 NUBP1P53384 320 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 NPEPPSP55786 919 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 NHLH1Q02575 133 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 TFDP1Q14186 410 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 PTPN21Q16825 1174 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 ATAT1Q5SQI0 421 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 PLA2G4FQ68DD2 849 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 UBALD2Q8IYN6 164 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 NRDE2Q9H7Z3 1164 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 RSAD1Q9HA92 442 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
SPARC-206ENST00000524277 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 ZNF318Q5VUA4 2279 aa13.22□□□□□ -0.29
SPARC-206ENST00000524277 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.21□□□□□ -0.29
SPARC-206ENST00000524277 NT5C1B-RDH14C9J2C7 533 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 LYPLA2O95372 231 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
SPARC-206ENST00000524277 CA8P35219 290 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 PTPN5P54829 565 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 EMC2Q15006 297 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms