RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 MAPKAPK3Q16644 382 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ERCC6LQ2NKX8 1250 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SLC45A4Q5BKX6 768 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 IGSF11Q5DX21 431 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 TCTE1Q5JU00 501 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 HABP4Q5JVS0 413 aaKnown RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 PPP2R2DQ66LE6 453 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 GPR139Q6DWJ6 353 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 RAB12Q6IQ22 244 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 TRAF7Q6Q0C0 670 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 IGF2-ASQ6U949 168 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ZYG11AQ6WRX3 759 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ZNF704Q6ZNC4 412 aaPredicted RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 ENOSF1Q7L5Y1 443 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SAMD7Q7Z3H4 446 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SRGAP1Q7Z6B7 1085 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 PHLDB2Q86SQ0 1253 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 PASD1Q8IV76 773 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SULF1Q8IWU6 871 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 CCDC33Q8N5R6 958 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SCAIQ8N9R8 606 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SLC4A11Q8NBS3 891 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 KLHDC4Q8TBB5 520 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ADAM32Q8TC27 787 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SSH3Q8TE77 659 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 DDI1Q8WTU0 396 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 OPTNQ96CV9 577 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 YME1L1Q96TA2 773 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 GPATCH1Q9BRR8 931 aaKnown RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 NUSAP1Q9BXS6 441 aaKnown RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 UCK1Q9HA47 277 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 POLE3Q9NRF9 147 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SEMA3GQ9NS98 782 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 TMEM260Q9NX78 707 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 GALNT8Q9NY28 637 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 EXTL2Q9UBQ6 330 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 EIF2B4Q9UI10 523 aaKnown RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 EXOC6BQ9Y2D4 811 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 CBY1Q9Y3M2 126 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 DAGLAQ9Y4D2 1042 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ATXN2Q99700 1313 aaKnown RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 ABHD14A-ACY1A0A1B0GW23 586 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 WDR91A4D1P6 747 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 NBPF26B4DH59 902 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 B4DLN1 442 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 SMIM24O75264 130 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 NIPSNAP2O75323 286 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 MAFO75444 373 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 FGF18O76093 207 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 TOMM70O94826 608 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 TRIM16O95361 564 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 ITGB3P05106 788 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 CYP11A1P05108 521 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
SDC2-208ENST00000523877 ALOX5P09917 674 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 DDX5P17844 614 aaKnown RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 CFL1P23528 166 aaKnown RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 ATP5F1P24539 256 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 SLC8A1P32418 973 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 MAP3K7CLP57077 242 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 GSDMDP57764 484 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 NOP14P78316 857 aaKnown RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 BEX3Q00994 111 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 MTMR3Q13615 1198 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 CUL2Q13617 745 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 SCARB2Q14108 478 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 DSC3Q14574 896 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 WHAMMP3Q1A5X7 153 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 XKR9Q5GH70 373 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 CEP85Q6P2H3 762 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 SLC2A7Q6PXP3 512 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 PI16Q6UXB8 463 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 RANBP10Q6VN20 620 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 RGS9BPQ6ZS82 235 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 TTLL7Q6ZT98 887 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 NUDT18Q6ZVK8 323 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 GALNT7Q86SF2 657 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 STX12Q86Y82 276 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 FAM186BQ8IYM0 893 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 CBARPQ8N350 705 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 DENND6BQ8NEG7 585 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 LILRB4Q8NHJ6 448 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 ENKURQ8TC29 256 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 POF1BQ8WVV4 589 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 KCTD13Q8WZ19 329 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 ZKSCAN4Q969J2 545 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 MED30Q96HR3 178 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 RUNDC3BQ96NL0 473 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 ASB2Q96Q27 587 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 RMDN3Q96TC7 470 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 MPHOSPH9Q99550 1183 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 TCF25Q9BQ70 676 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 HAUS8Q9BT25 410 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 PUS3Q9BZE2 481 aaKnown RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 ASPSCR1Q9BZE9 553 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms