RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	SLC9A1	P19634	815 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	APEX1	P27695	318 aa	Known RBP	6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	IGFALS	P35858	605 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	ATP2C1	P98194	919 aa	Predicted RBP	6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	CHST14	Q8NCH0	376 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	ZNF341	Q9BYN7	854 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	PLA2G3	Q9NZ20	509 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	H2AFY2	Q9P0M6	372 aa	Predicted RBP	6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	G3BP2	Q9UN86	482 aa	Known RBP	6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	SLC30A1	Q9Y6M5	507 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	LRRC7	Q96NW7	1537 aa		6.23	□□□□□ -1.41
SREK1-213	ENST00000523655	TCOF1	Q13428	1488 aa	Known RBP	6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	MAGI2	Q86UL8	1455 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	CCDC194	A0A1B0GVG4	234 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	TPD52L2	O43399	206 aa	Known RBP	6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	NPTXR	O95502	500 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	MAP4K4	O95819	1239 aa	Predicted RBP	6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	JMJD7	P0C870	316 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	ACVRL1	P37023	503 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	KLF10	Q13118	480 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	FNDC3B	Q53EP0	1204 aa	Known RBP	6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	MEX3C	Q5U5Q3	659 aa	Known RBP	6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	MAMDC4	Q6UXC1	1216 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	RNF207	Q6ZRF8	634 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	KRT26	Q7Z3Y9	468 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	POLN	Q7Z5Q5	900 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	SYNPO	Q8N3V7	929 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	KIAA1958	Q8N8K9	716 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	CALML6	Q8TD86	181 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	SRRD	Q9UH36	339 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	RICTOR	Q6R327	1708 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	PLA2R1	Q13018	1463 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	RAPGEF2	Q9Y4G8	1499 aa		6.22	□□□□□ -1.41
SREK1-213	ENST00000523655	C3	P01024	1663 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	C2orf78	A6NCI8	922 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	PRL	P01236	227 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	ASL	P04424	464 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	C1S	P09871	688 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	FOXE3	Q13461	319 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	GRM7	Q14831	915 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	TCEA2	Q15560	299 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	CDCA2	Q69YH5	1023 aa	Predicted RBP	6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	SHCBP1	Q8NEM2	672 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	EDA	Q92838	391 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	RPL10L	Q96L21	214 aa	Known RBP	6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	FOXB1	Q99853	325 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	TLR9	Q9NR96	1032 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	RBM8A	Q9Y5S9	174 aa	Known RBP	6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	C9orf84	Q5VXU9	1444 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	ABCA9	Q8IUA7	1624 aa		6.21	□□□□□ -1.42
SREK1-213	ENST00000523655	GDF5	P43026	501 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	DALRD3	Q5D0E6	543 aa	Known RBP	6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	CREB3L3	Q68CJ9	461 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	ESRP1	Q6NXG1	681 aa	Known RBP	6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	NXPE1	Q8N323	547 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	IL17D	Q8TAD2	202 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	JDP2	Q8WYK2	163 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	ZNF503	Q96F45	646 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	SORCS2	Q96PQ0	1159 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	PSMD1	Q99460	953 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	ELF4	Q99607	663 aa	Predicted RBP	6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	SEMA4A	Q9H3S1	761 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	MYH16	Q9H6N6	1097 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	ZMYM4	Q5VZL5	1548 aa		6.2	□□□□□ -1.42
SREK1-213	ENST00000523655	CBX4	O00257	560 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	SLC26A4	O43511	780 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	HIBADH	P31937	336 aa	Known RBP	6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	C1QTNF8	P60827	252 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	RIN1	Q13671	783 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	MYBPC3	Q14896	1274 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	ARHGAP44	Q17R89	818 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	PRAMEF9	Q5VWM5	478 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	SLFN12L	Q6IEE8	588 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	FMNL3	Q8IVF7	1028 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	C1orf210	Q8IVY1	113 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	OR5AN1	Q8NGI8	311 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	MAML3	Q96JK9	1138 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	C16orf92	Q96LL3	132 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	TUBGCP5	Q96RT8	1024 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	CSRNP2	Q9H175	543 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	PCIF1	Q9H4Z3	704 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	SAE1	Q9UBE0	346 aa	Predicted RBP	6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	B4GALT6	Q9UBX8	382 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	DNAI1	Q9UI46	699 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	PLAA	Q9Y263	795 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	CD2AP	Q9Y5K6	639 aa		6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	CDK12	Q9NYV4	1490 aa	Predicted RBP	6.19	□□□□□ -1.42
SREK1-213	ENST00000523655	HECW1	Q76N89	1606 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	FAM135B	Q49AJ0	1406 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	UBA6	A0AVT1	1052 aa	Predicted RBP	6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	FAM83G	A6ND36	823 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655		H7C1D1	291 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	FZD7	O75084	574 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	RPS19	P39019	145 aa	Known RBP	6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	ADCY7	P51828	1080 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms