RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PRICKLE3O43900 615 aaPredicted RBP8□□□□□ -1.13
CPNE3-206ENST00000523469 MTHFD2P13995 350 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 RAC3P60763 192 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 RNF151Q2KHN1 245 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 INAVAQ3KP66 663 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 CLEC14AQ86T13 490 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 CBARPQ8N350 705 aaPredicted RBP8□□□□□ -1.13
CPNE3-206ENST00000523469 GCDHQ92947 438 aaPredicted RBP8□□□□□ -1.13
CPNE3-206ENST00000523469 SLC7A6OSQ96CW6 309 aaPredicted RBP8□□□□□ -1.13
CPNE3-206ENST00000523469 JADE2Q9NQC1 790 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 TYW1Q9NV66 732 aaKnown RBP8□□□□□ -1.13
CPNE3-206ENST00000523469 EDARQ9UNE0 448 aa8□□□□□ -1.13
CPNE3-206ENST00000523469 A0A0G2JLL6 359 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 PLATP00750 562 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 HNRNPLP14866 589 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 HGFACQ04756 655 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 LMBR1LQ6UX01 489 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 GAREM2Q75VX8 874 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 GLB1L2Q8IW92 636 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 AUTS2Q8WXX7 1259 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 FDXACB1Q9BRP7 624 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 QRSL1Q9H0R6 528 aaKnown RBP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 CCDC8Q9H0W5 538 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 CCM2LQ9NUG4 571 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 DPP7Q9UHL4 492 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 EVLQ9UI08 416 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-206ENST00000523469 ZNF536O15090 1300 aa7.99□□□□□ -1.13
CPNE3-206ENST00000523469 PRDM2Q13029 1718 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 ARID1BQ8NFD5 2236 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 TRIM75PA6NK02 468 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 CFBP00751 764 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 EXOSC10Q01780 885 aaKnown RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 TBC1D10BQ4KMP7 808 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 BRDTQ58F21 947 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 KCNK18Q7Z418 384 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 AMOTL1Q8IY63 956 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 PLA2G15Q8NCC3 412 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 OR14K1Q8NGZ2 314 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 NEIL1Q96FI4 390 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 LMF1Q96S06 567 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 SLC6A15Q9H2J7 730 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 MSL2Q9HCI7 577 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 DNAJC28Q9NX36 388 aa7.98□□□□□ -1.13
CPNE3-206ENST00000523469 PUF60Q9UHX1 559 aaKnown RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 RBM8AQ9Y5S9 174 aaKnown RBP7.98□□□□□ -1.13
CPNE3-206ENST00000523469 C2orf78A6NCI8 922 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 GABRDO14764 452 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 GAAP10253 952 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 IARSP41252 1262 aaKnown RBP7.97□□□□□ -1.13
CPNE3-206ENST00000523469 SRSF2Q01130 221 aaKnown RBP7.97□□□□□ -1.13
CPNE3-206ENST00000523469 TCIRG1Q13488 830 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 NFIXQ14938 502 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 MUM1Q2TAK8 710 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 TOR2AQ5JU69 321 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 UNC5BQ8IZJ1 945 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 CFHR4Q92496 578 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 UIMC1Q96RL1 719 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 ASPSCR1Q9BZE9 553 aa7.97□□□□□ -1.13
CPNE3-206ENST00000523469 C14orf93Q9H972 538 aaKnown RBP7.97□□□□□ -1.13
CPNE3-206ENST00000523469 DDX56Q9NY93 547 aaKnown RBP7.97□□□□□ -1.13
CPNE3-206ENST00000523469 PMS2P1A4D2B8 440 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 LY86O95711 162 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 ADCY7P51828 1080 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 CD69Q07108 199 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 MGAT5Q09328 741 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 PGM2L1Q6PCE3 622 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 ANKRD13AQ8IZ07 590 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 C1orf162Q8NEQ5 155 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-206ENST00000523469 PAWRQ96IZ0 340 aaKnown RBP7.96□□□□□ -1.14
CPNE3-206ENST00000523469 MEGF9Q9H1U4 602 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 PPP4R1LQ9P1A2 415 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 OAZ3Q9UMX2 235 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 SPEF1Q9Y4P9 236 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 ERCC6L2Q5T890 1561 aa7.96□□□□□ -1.14
CPNE3-206ENST00000523469 KIF13AQ9H1H9 1805 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 SHTN1A0MZ66 631 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 NPEPPSL1A6NEC2 478 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 MATN2O00339 956 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 MYBL2P10244 700 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 CR2P20023 1033 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 MTNR1BP49286 362 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 SLC5A3P53794 718 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 ATP2C1P98194 919 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-206ENST00000523469 CDK17Q00537 523 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 GAGE13Q4V321 117 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 TSPEARQ8WU66 669 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 STAG1Q8WVM7 1258 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 SSH1Q8WYL5 1049 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 LRRC37BQ96QE4 947 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 C12orf65Q9H3J6 166 aaKnown RBP7.95□□□□□ -1.14
CPNE3-206ENST00000523469 IFT122Q9HBG6 1241 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 MKS1Q9NXB0 559 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 MROH2BQ7Z745 1585 aa7.95□□□□□ -1.14
CPNE3-206ENST00000523469 A0A1W2PR48 441 aa7.94□□□□□ -1.14
CPNE3-206ENST00000523469 SLC26A4O43511 780 aa7.94□□□□□ -1.14
CPNE3-206ENST00000523469 MT-CO1P00395 513 aa7.94□□□□□ -1.14
CPNE3-206ENST00000523469 RBP3P10745 1247 aa7.94□□□□□ -1.14
CPNE3-206ENST00000523469 KIR2DL3P43628 341 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms