RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ST18O60284 1047 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 GALTP07902 379 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
SDC2-207ENST00000522911 PBX3P40426 434 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 PSMC5P62195 406 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 MTMR3Q13615 1198 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
SDC2-207ENST00000522911 NOMO2Q5JPE7 1267 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 GLB1LQ6UWU2 654 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 CYP26C1Q6V0L0 522 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 ANO5Q75V66 913 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 RUFY3Q7L099 469 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 PPFIBP1Q86W92 1011 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 BLIDQ8IZY5 108 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 VPS52Q8N1B4 723 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 SLC22A17Q8WUG5 538 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 POMKQ9H5K3 350 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
SDC2-207ENST00000522911 AGPAT5Q9NUQ2 364 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 FAM105AQ9NUU6 356 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 TBC1D13Q9NVG8 400 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 CNTNAP2Q9UHC6 1331 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 A0A087WZ62 844 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 C2CD4DB7Z1M9 353 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 LILRB3O75022 631 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 OFD1O75665 1012 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 CXCL14O95715 111 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 QARSP47897 775 aaKnown RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 POU5F1BQ06416 359 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 SSRP1Q08945 709 aaKnown RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
SDC2-207ENST00000522911 MTERF2Q49AM1 385 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 TWF2Q6IBS0 349 aaKnown RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 C15orf39Q6ZRI6 1047 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 TRMT1LQ7Z2T5 733 aaKnown RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 SRGAP1Q7Z6B7 1085 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 GPR65Q8IYL9 337 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 KREMEN2Q8NCW0 462 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 PGBD4Q96DM1 585 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 SCLT1Q96NL6 688 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 TMEM175Q9BSA9 504 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 CYP26B1Q9NR63 512 aa10.54□□□□□ -0.72
SDC2-207ENST00000522911 SUCLA2Q9P2R7 463 aaPredicted RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 PIN4Q9Y237 131 aaKnown RBP10.54□□□□□ -0.72
SDC2-207ENST00000522911 ZMYM2Q9UBW7 1377 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 ASAP2O43150 1006 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 CHMP2AO43633 222 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 ZC3H11AO75152 810 aaKnown RBP eCLIP10.53□□□□□ -0.728e-7■■□□□ 13.7
SDC2-207ENST00000522911 TDP2O95551 362 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 EFEMP2O95967 443 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 P4HBP07237 508 aaKnown RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 IBSPP21815 317 aaPredicted RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 FGFR4P22455 802 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 RFC5P40937 340 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 CLCN5P51795 746 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 VCPP55072 806 aaKnown RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 PTPN14Q15678 1187 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 ATAT1Q5SQI0 421 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 AGMOQ6ZNB7 445 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 TMEM173Q86WV6 379 aaPredicted RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 C4orf19Q8IY42 314 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 RNF169Q8NCN4 708 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 CNNM3Q8NE01 707 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 CMASQ8NFW8 434 aaPredicted RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 SLC7A3Q8WY07 619 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 NAP1L4Q99733 375 aaKnown RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 UBN1Q9NPG3 1134 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 DDX25Q9UHL0 483 aaKnown RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 VAV3Q9UKW4 847 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 STK36Q9NRP7 1315 aa10.53□□□□□ -0.72
SDC2-207ENST00000522911 ZFHX2Q9C0A1 2572 aaPredicted RBP10.53□□□□□ -0.72
SDC2-207ENST00000522911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 CPLX1O14810 134 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 CSDE1O75534 798 aaKnown RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 BRD1O95696 1058 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 AXLP30530 894 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 HOXA11P31270 313 aaPredicted RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 CCT2P78371 535 aaKnown RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 GPR149Q86SP6 731 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 RNF168Q8IYW5 571 aaPredicted RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 TDRD5Q8NAT2 981 aaKnown RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 HDAC7Q8WUI4 952 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 PSPC1Q8WXF1 523 aaKnown RBP10.52□□□□□ -0.73
SDC2-207ENST00000522911 CCDC51Q96ER9 411 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 PHF20Q9BVI0 1012 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms