RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PLCB3Q01970 1234 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 FERMT3Q86UX7 667 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 RNF149Q8NC42 400 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 TCP11Q8WWU5 503 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 MTMR9Q96QG7 549 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 HSD17B14Q9BPX1 270 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 XPNPEP1Q9NQW7 623 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 SPG21Q9NZD8 308 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 PUF60Q9UHX1 559 aaKnown RBP23.1■■□□□ 1.29
SDCBP-209ENST00000522243 POTEMA6NI47 508 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 FSCN2O14926 492 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 ZP2Q05996 745 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 SMAD4Q13485 552 aaKnown RBP23.09■■□□□ 1.29
SDCBP-209ENST00000522243 SMAD2Q15796 467 aaKnown RBP23.09■■□□□ 1.29
SDCBP-209ENST00000522243 SRGAP1Q7Z6B7 1085 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 MSLNLQ96KJ4 702 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 TCF25Q9BQ70 676 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 LLPHQ9BRT6 129 aaKnown RBP23.09■■□□□ 1.29
SDCBP-209ENST00000522243 TRAIPQ9BWF2 469 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 ENTPD7Q9NQZ7 604 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 AGPAT5Q9NUQ2 364 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 LZTS1Q9Y250 596 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 INPP5FQ9Y2H2 1132 aa23.09■■□□□ 1.29
SDCBP-209ENST00000522243 SKIP12755 728 aa23.08■■□□□ 1.29
SDCBP-209ENST00000522243 KRT17Q04695 432 aa23.08■■□□□ 1.29
SDCBP-209ENST00000522243 DUSP6Q16828 381 aa23.08■■□□□ 1.29
SDCBP-209ENST00000522243 SLC39A11Q8N1S5 342 aa23.08■■□□□ 1.29
SDCBP-209ENST00000522243 PIGOQ8TEQ8 1089 aa23.08■■□□□ 1.29
SDCBP-209ENST00000522243 ZSCAN31Q96LW9 406 aaPredicted RBP23.08■■□□□ 1.29
SDCBP-209ENST00000522243 MRPL9Q9BYD2 267 aaKnown RBP23.08■■□□□ 1.29
SDCBP-209ENST00000522243 MUC3AQ02505 3323 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 FAM86C2PA6NEL3 165 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 PI4K2BG5E9Z4 385 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 ASAP2O43150 1006 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 GAS2O43903 313 aaKnown RBP23.07■■□□□ 1.28
SDCBP-209ENST00000522243 LYPLA2O95372 231 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 PPM1AP35813 382 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 BCAR1P56945 870 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 ZNF174Q15697 407 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 PDE12Q6L8Q7 609 aaKnown RBP23.07■■□□□ 1.28
SDCBP-209ENST00000522243 ADHFE1Q8IWW8 467 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 VN1R2Q8NFZ6 395 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 CCDC43Q96MW1 224 aaKnown RBP23.07■■□□□ 1.28
SDCBP-209ENST00000522243 ANKEF1Q9NU02 776 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 PRKAG3Q9UGI9 489 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 PCDHB2Q9Y5E7 798 aa23.07■■□□□ 1.28
SDCBP-209ENST00000522243 HIDE1A8MVS5 230 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 ZNF623O75123 536 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 ZC3H11AO75152 810 aaKnown RBP eCLIP23.06■■□□□ 1.28
SDCBP-209ENST00000522243 OFD1O75665 1012 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 RAB27AP51159 221 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 GLB1LQ6UWU2 654 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 TMC7Q7Z402 723 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 LRFN3Q9BTN0 628 aa23.06■■□□□ 1.28
SDCBP-209ENST00000522243 C19orf67A6NJJ6 358 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 HOXA11P31270 313 aaPredicted RBP23.05■■□□□ 1.28
SDCBP-209ENST00000522243 TECP42680 631 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 ALDH7A1P49419 539 aaKnown RBP23.05■■□□□ 1.28
SDCBP-209ENST00000522243 RARRES1P49788 294 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 HMGN5P82970 282 aaKnown RBP23.05■■□□□ 1.28
SDCBP-209ENST00000522243 NOMO2Q5JPE7 1267 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 UBXN11Q5T124 520 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 ASAP3Q8TDY4 903 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 PGBD4Q96DM1 585 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 GBP3Q9H0R5 595 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 NRDE2Q9H7Z3 1164 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 C11orf16Q9NQ32 467 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 SH2B1Q9NRF2 756 aaPredicted RBP23.05■■□□□ 1.28
SDCBP-209ENST00000522243 TBC1D13Q9NVG8 400 aa23.05■■□□□ 1.28
SDCBP-209ENST00000522243 DGAT1O75907 488 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 EYA4O95677 639 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 SPATA31C1P0DKV0 1188 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 CA8P35219 290 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 COASYQ13057 564 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 GNL2Q13823 731 aaKnown RBP23.04■■□□□ 1.28
SDCBP-209ENST00000522243 TMEM31Q5JXX7 168 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 LLGL2Q6P1M3 1020 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 AGMOQ6ZNB7 445 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 MAEAQ7L5Y9 396 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 TMEM173Q86WV6 379 aaPredicted RBP23.04■■□□□ 1.28
SDCBP-209ENST00000522243 SMRP1Q8NCR6 262 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 FBXO18Q8NFZ0 1043 aa23.04■■□□□ 1.28
SDCBP-209ENST00000522243 CDCA3Q99618 268 aaPredicted RBP23.04■■□□□ 1.28
SDCBP-209ENST00000522243 FOXP1Q9H334 677 aaPredicted RBP23.04■■□□□ 1.28
SDCBP-209ENST00000522243 NGRNQ9NPE2 291 aaKnown RBP23.04■■□□□ 1.28
SDCBP-209ENST00000522243 USO1O60763 962 aaKnown RBP23.03■■□□□ 1.28
SDCBP-209ENST00000522243 MED24O75448 989 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 ERLIN2O94905 339 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 OR52Z1P0C646 297 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 ARL2P36404 184 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 AFF1P51825 1210 aaKnown RBP23.03■■□□□ 1.28
SDCBP-209ENST00000522243 PTENP60484 403 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 RNASELQ05823 741 aaKnown RBP23.03■■□□□ 1.28
SDCBP-209ENST00000522243 CAPSQ13938 189 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 TFDP1Q14186 410 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 MXD4Q14582 209 aaPredicted RBP23.03■■□□□ 1.28
SDCBP-209ENST00000522243 CATSPER3Q86XQ3 398 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 TMEM169Q96HH4 297 aa23.03■■□□□ 1.28
SDCBP-209ENST00000522243 CPB2Q96IY4 423 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms