RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NTSR2O95665 410 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 CHRNA3P32297 505 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 ARL4AP40617 200 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 JAK3P52333 1124 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 SLC20A2Q08357 652 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 ZNF449Q6P9G9 518 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 SULF1Q8IWU6 871 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 SAYSD1Q9NPB0 183 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 ZNF335Q9H4Z2 1342 aaPredicted RBP14.78□□□□□ -0.04
SYNPO-205ENST00000522122 SPEF2Q9C093 1822 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 ARHGAP27Q6ZUM4 889 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 PODNQ7Z5L7 613 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 FRMD5Q7Z6J6 570 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 BANK1Q8NDB2 785 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 RFFLQ8WZ73 363 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 FAM187AA6NFU0 413 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 MYMKA6NI61 221 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 STAT3P40763 770 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 MTMR1Q13613 665 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 KDM7AQ6ZMT4 941 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 C7orf31Q8N865 590 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 RBM41Q96IZ5 413 aaKnown RBP14.78□□□□□ -0.04
SYNPO-205ENST00000522122 QTRT2Q9H974 415 aaKnown RBP14.78□□□□□ -0.04
SYNPO-205ENST00000522122 KIAA1586Q9HCI6 787 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 KBTBD4Q9NVX7 518 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 MAD2L2Q9UI95 211 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 PLAGL2Q9UPG8 496 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 RASA4BC9J798 803 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 RASA4O43374 803 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 PLS3P13797 630 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 VAMP7P51809 220 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 OSTNP61366 133 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 ITKQ08881 620 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 MMEL1Q495T6 779 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 RAPH1Q70E73 1250 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 APOL6Q9BWW8 343 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 ZNF341Q9BYN7 854 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 TBC1D22BQ9NU19 505 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 SMARCAL1Q9NZC9 954 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 IQANK1A0A1B0GTG1 560 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 ESRRAP11474 423 aaPredicted RBP14.77□□□□□ -0.04
SYNPO-205ENST00000522122 CAV1Q03135 178 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 TAF11Q15544 211 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 NBPF9Q3BBW0 867 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 SH2D3CQ8N5H7 860 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 DNAAF3Q8N9W5 541 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 TMEM35BQ8NCS4 154 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 FBXO41Q8TF61 875 aa14.77□□□□□ -0.04
SYNPO-205ENST00000522122 MED1Q15648 1581 aaPredicted RBP14.77□□□□□ -0.04
SYNPO-205ENST00000522122 PRPSAP1Q14558 356 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 EARS2Q5JPH6 523 aaKnown RBP14.77□□□□□ -0.05
SYNPO-205ENST00000522122 VGLL2Q8N8G2 317 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 ZNF564Q8TBZ8 553 aaPredicted RBP14.77□□□□□ -0.05
SYNPO-205ENST00000522122 MASTLQ96GX5 879 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 INTS2Q9H0H0 1204 aaKnown RBP14.77□□□□□ -0.05
SYNPO-205ENST00000522122 GINM1Q9NU53 330 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 LRRC10BA6NIK2 292 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 WDR64B1ANS9 1081 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 SF3B3Q15393 1217 aaKnown RBP14.77□□□□□ -0.05
SYNPO-205ENST00000522122 FAM47CQ5HY64 1035 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 CCDC68Q9H2F9 335 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 TDRD3Q9H7E2 651 aaKnown RBP14.77□□□□□ -0.05
SYNPO-205ENST00000522122 SLC38A10Q9HBR0 1119 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 FBXL5Q9UKA1 691 aa14.77□□□□□ -0.05
SYNPO-205ENST00000522122 PDXKO00764 312 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 AKR1B1P15121 316 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SRRM1Q8IYB3 904 aaKnown RBP14.76□□□□□ -0.05
SYNPO-205ENST00000522122 GSDMBQ8TAX9 411 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 RMDN3Q96TC7 470 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SPC25Q9HBM1 224 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SMYD2Q9NRG4 433 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SLC16A4O15374 487 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 ZBED1O96006 694 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 P4HBP07237 508 aaKnown RBP14.76□□□□□ -0.05
SYNPO-205ENST00000522122 RFX1P22670 979 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 ZNF746Q6NUN9 644 aaPredicted RBP14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SCARA5Q6ZMJ2 495 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 PCGF5Q86SE9 256 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 CAVIN3Q969G5 261 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 AMACRQ9UHK6 382 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 DCCP43146 1447 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 RPS6KA5O75582 802 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 LSP1P33241 339 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 AGBL2Q5U5Z8 902 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 NUB1Q9Y5A7 615 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 DCTN3O75935 186 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SRGAP2CP0DJJ0 459 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SKIP12755 728 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 PSMA2P25787 234 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 PBX1P40424 430 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
SYNPO-205ENST00000522122 NR1H3Q13133 447 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 FAM47EQ6ZV65 393 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 HVCN1Q96D96 273 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 PPP1R9AQ9ULJ8 1098 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 PFASO15067 1338 aa14.76□□□□□ -0.05
SYNPO-205ENST00000522122 SLC16A3O15427 465 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms