RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 MAPK4P31152 587 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 ZNF76P36508 570 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 IGHMBP2P38935 993 aaKnown RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 ETV3P41162 512 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 MAPK8P45983 427 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 ID4P47928 161 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 GNL2Q13823 731 aaKnown RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 PLEKHH3Q7Z736 793 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 CRACR2BQ8N4Y2 399 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 KLHDC9Q8NEP7 349 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 GPRC5AQ8NFJ5 357 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 ZNF384Q8TF68 577 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 EDC3Q96F86 508 aaKnown RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 KAZALD1Q96I82 304 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 IDI2Q9BXS1 227 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 PUS3Q9BZE2 481 aaKnown RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 WNT8AQ9H1J5 351 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 TRIT1Q9H3H1 467 aaKnown RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 UBE2ZQ9H832 354 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 CERS4Q9HA82 394 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 SLC28A3Q9HAS3 691 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 BTBD7Q9P203 1132 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 DUSP13Q9UII6 198 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 MBD1Q9UIS9 605 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-208ENST00000521037 PCDHA11Q9Y5I1 949 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 MAST4O15021 2626 aa4.84□□□□□ -1.63
VPS13B-208ENST00000521037 MAP1BP46821 2468 aaKnown RBP4.84□□□□□ -1.64
VPS13B-208ENST00000521037 PTPRSQ13332 1948 aa4.84□□□□□ -1.64
VPS13B-208ENST00000521037 FASNP49327 2511 aaKnown RBP4.83□□□□□ -1.64
VPS13B-208ENST00000521037 TPRP12270 2363 aaKnown RBP4.83□□□□□ -1.64
VPS13B-208ENST00000521037 GRIN2DO15399 1336 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 MYO9BQ13459 2157 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 SLC15A5A6NIM6 579 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 ADCY6O43306 1168 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 CA3P07451 260 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 HIBADHP31937 336 aaKnown RBP4.83□□□□□ -1.64
VPS13B-208ENST00000521037 CYP2C18P33260 490 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 NBL1P41271 181 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 RGS3P49796 1198 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 TEKQ02763 1124 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 PSMD2Q13200 908 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 UBE4AQ14139 1066 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 GCKRQ14397 625 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 TTBK2Q6IQ55 1244 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 GIMAP6Q6P9H5 292 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 CCDC129Q6ZRS4 1044 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 UBE3BQ7Z3V4 1068 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 FAM126BQ8IXS8 530 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 ARRDC4Q8NCT1 418 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 ACSF2Q96CM8 615 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-208ENST00000521037 HOOK2Q96ED9 719 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 C12orf49Q9H741 205 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 DNAJC18Q9H819 358 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 IL23AQ9NPF7 189 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 GPATCH2Q9NW75 528 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 VTI1BQ9UEU0 232 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 MUTYHQ9UIF7 546 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 MSRAQ9UJ68 235 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 MAP3K2Q9Y2U5 619 aa4.83□□□□□ -1.64
VPS13B-208ENST00000521037 PTPRZ1P23471 2315 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-208ENST00000521037 LAMA5O15230 3695 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 ZFYVE26Q68DK2 2539 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 MYBBP1AQ9BQG0 1328 aaKnown RBP4.82□□□□□ -1.64
VPS13B-208ENST00000521037 FAM186AA6NE01 2351 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 GPR179Q6PRD1 2367 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 LCHNA4D1U4 455 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 PI4KAP2A4QPH2 592 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 ANKRD62A6NC57 917 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 LRRN2O75325 713 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 ENTPD3O75355 529 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 PGK1P00558 417 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 PGRP06401 933 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 USP17L7P0C7H9 530 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 FGFR2P21802 821 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 LTBRP36941 435 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 GALK1P51570 392 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 RHBDL3P58872 404 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 PPIGQ13427 754 aaKnown RBP eCLIP4.82□□□□□ -1.642e-6■□□□□ 8.2
VPS13B-208ENST00000521037 SEPT6Q14141 434 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 GPNMBQ14956 572 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 OLFML2BQ68BL8 750 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 ALG1LQ6GMV1 187 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 G2E3Q7L622 706 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 NLRX1Q86UT6 975 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 SPPL2CQ8IUH8 684 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 TMEM151BQ8IW70 566 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 PI4KAP1Q8N8J0 262 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
VPS13B-208ENST00000521037 EDAQ92838 391 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 LNPKQ9C0E8 428 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 FAM8A1Q9UBU6 413 aa4.82□□□□□ -1.64
VPS13B-208ENST00000521037 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
VPS13B-208ENST00000521037 TNKSO95271 1327 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 KBTBD13C9JR72 458 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 H0Y858 1186 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 HRKO00198 91 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 FRAT2O75474 233 aaPredicted RBP4.81□□□□□ -1.64
VPS13B-208ENST00000521037 PI3P19957 117 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 ATP2B1P20020 1258 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms