RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TMPRSS11EQ9UL52 423 aa4.46□□□□□ -1.7
HMGB1P41-201ENST00000520234 TRIM75PA6NK02 468 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 DAPK3O43293 454 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 FSBPO95073 299 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 PDGFRBP09619 1106 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 CLEC2LP0C7M8 214 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 CNR2P34972 360 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 GPR3P46089 330 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 NRG3P56975 720 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 ANTXR2P58335 489 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 KRT85P78386 507 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 SPIDRQ14159 915 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 PCOLCEQ15113 449 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 SMN1Q16637 294 aaKnown RBP4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 ZNF568Q3ZCX4 644 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 BRDTQ58F21 947 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 CT83Q5H943 113 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 PITRM1Q5JRX3 1037 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 AMOTL1Q8IY63 956 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 SH3RF3Q8TEJ3 882 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 GAB3Q8WWW8 586 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 DVL3Q92997 716 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 EAF2Q96CJ1 260 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 LOXL4Q96JB6 756 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 PUS7Q96PZ0 661 aaKnown RBP4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 OR10A2Q9H208 303 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 PRSS50Q9UI38 385 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 TRHDEQ9UKU6 1024 aa4.45□□□□□ -1.7
HMGB1P41-201ENST00000520234 SHTN1A0MZ66 631 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 GABRDO14764 452 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 B4GALT3O60512 393 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 RGS19P49795 217 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 MRE11P49959 708 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 STAT5BP51692 787 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLC5A3P53794 718 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 ATXN1P54253 815 aaKnown RBP4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 LGALS4P56470 323 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 PURAQ00577 322 aaKnown RBP4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 NFYCQ13952 458 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 AGBL4Q5VU57 503 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 LARP4Q71RC2 724 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 SPRED1Q7Z699 444 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 LYSMD2Q8IV50 215 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLC41A1Q8IVJ1 513 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 CMIPQ8IY22 773 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 CBARPQ8N350 705 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 PPP1R14CQ8TAE6 165 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 STAG1Q8WVM7 1258 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 AUTS2Q8WXX7 1259 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 NKD2Q969F2 451 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 ASPSCR1Q9BZE9 553 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 KCTD10Q9H3F6 313 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 MSL2Q9HCI7 577 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 JADE2Q9NQC1 790 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 DNAJC28Q9NX36 388 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 CDY2AQ9Y6F7 541 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLC4A7Q9Y6M7 1214 aa4.44□□□□□ -1.7
HMGB1P41-201ENST00000520234 PCSK5Q92824 1860 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 A0A0A6YYK5 440 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 PMS2P1A4D2B8 440 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 PPM1GO15355 546 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 ARHGAP6O43182 974 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 B4GALT4O60513 344 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 SEC24DO94855 1032 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 LPLP06858 475 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 ZNF888P0CJ79 500 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 RBP3P10745 1247 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 PPP2CBP62714 309 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 PPP2CAP67775 309 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 PPARAQ07869 468 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 TRIM25Q14258 630 aaKnown RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 ANO4Q32M45 955 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 GJC2Q5T442 439 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 PGM2L1Q6PCE3 622 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 LMBR1LQ6UX01 489 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 ARHGEF18Q6ZSZ5 1173 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 USP30Q70CQ3 517 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 GPR155Q7Z3F1 870 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 KCNK18Q7Z418 384 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 GLB1L2Q8IW92 636 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 C1orf162Q8NEQ5 155 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 TGFBRAP1Q8WUH2 860 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 GCDHQ92947 438 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLC7A6OSQ96CW6 309 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 FAXDC2Q96IV6 333 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 SOX7Q9BT81 388 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 SLC13A1Q9BZW2 595 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 CCDC8Q9H0W5 538 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 SEC61A2Q9H9S3 476 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 CCM2LQ9NUG4 571 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 MKS1Q9NXB0 559 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 DNAI1Q9UI46 699 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 MAGEL2Q9UJ55 1249 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 FAM184BQ9ULE4 1060 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 CTDP1Q9Y5B0 961 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 MRFAP1Q9Y605 127 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 DUSP10Q9Y6W6 482 aa4.43□□□□□ -1.7
HMGB1P41-201ENST00000520234 MYBL2P10244 700 aa4.42□□□□□ -1.7
HMGB1P41-201ENST00000520234 MTNR1BP49286 362 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms