RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SORBS3O60504 671 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 FOXD2O60548 495 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 LRP3O75074 770 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 PARP1P09874 1014 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 POLR2MP0CAP2 368 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 TCF7P36402 384 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 GSK3AP49840 483 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 RARS2Q5T160 578 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 UTP14CQ5TAP6 766 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 CYP26C1Q6V0L0 522 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 C15orf39Q6ZRI6 1047 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 TRIM50Q86XT4 487 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 ABI1Q8IZP0 508 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 NETO1Q8TDF5 533 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 ESR2Q92731 530 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 STAMQ92783 540 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 GLG1Q92896 1179 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 SHDQ96IW2 340 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 MRPL9Q9BYD2 267 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 RHOBTB2Q9BYZ6 727 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 CELF4Q9BZC1 486 aaKnown RBP5.62□□□□□ -1.51
SDCBP-207ENST00000520168 TMEM117Q9H0C3 514 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 CWH43Q9H720 699 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 KAT14Q9H8E8 782 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 JMJD4Q9H9V9 463 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 ATP6V0A4Q9HBG4 840 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 SPG21Q9NZD8 308 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 DPP7Q9UHL4 492 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 MAP4K5Q9Y4K4 846 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 PCDHA2Q9Y5H9 948 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 WDR81Q562E7 1941 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 SPTBN2O15020 2390 aa5.62□□□□□ -1.51
SDCBP-207ENST00000520168 SMIM35A0A1B0GVV1 85 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 C9IYK1 514 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 RNF225M0QZC1 329 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-207ENST00000520168 LOC400499M0QZD8 3231 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 OPLAHO14841 1288 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 TBC1D4O60343 1298 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 CLASP2O75122 1294 aaKnown RBP5.61□□□□□ -1.51
SDCBP-207ENST00000520168 RPS6KA5O75582 802 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 GOLGA8HP0CJ92 632 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 SRFP11831 508 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 GATMP50440 423 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 POLGP54098 1239 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-207ENST00000520168 KRT76Q01546 638 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 APOBRQ0VD83 1088 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.61□□□□□ -1.51
SDCBP-207ENST00000520168 LETM2Q2VYF4 491 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 GREB1Q4ZG55 1949 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 MARCH8Q5T0T0 291 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 GPR149Q86SP6 731 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 NLRX1Q86UT6 975 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 CABP7Q86V35 215 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 SIRT2Q8IXJ6 389 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 TMEM151AQ8N4L1 468 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 DCLK2Q8N568 766 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 KCTD17Q8N5Z5 321 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 IL31RAQ8NI17 732 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 ATRIPQ8WXE1 791 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 SEPT1Q8WYJ6 367 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 RIN2Q8WYP3 895 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-207ENST00000520168 GPKOWQ92917 476 aaPredicted RBP eCLIP5.61□□□□□ -1.511e-6■□□□□ 11.3
SDCBP-207ENST00000520168 COL26A1Q96A83 441 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 TMEM169Q96HH4 297 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 C1QTNF2Q9BXJ5 285 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 FAM126AQ9BYI3 521 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-207ENST00000520168 UBA5Q9GZZ9 404 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 EPC1Q9H2F5 836 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 TBC1D17Q9HA65 648 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 HELLSQ9NRZ9 838 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 DLGAP2Q9P1A6 1054 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 DNMT3LQ9UJW3 386 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 GMEB2Q9UKD1 530 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 ANGPTL2Q9UKU9 493 aa5.61□□□□□ -1.51
SDCBP-207ENST00000520168 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 KRBA1A5PL33 1030 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SLC30A4O14863 429 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 FOXP2O15409 715 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 MAFGO15525 162 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 LAMTOR5O43504 91 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 HOXA13P31271 388 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 CA8P35219 290 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 ALDH7A1P49419 539 aaKnown RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SLC26A2P50443 739 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 FAM189BP81408 668 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 MRPS9P82933 396 aaKnown RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SHC2P98077 582 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 PPM1JQ5JR12 505 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 FAM102BQ5T8I3 360 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 PCNX4Q63HM2 1172 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 VASH1Q7L8A9 365 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 ZBTB44Q8NCP5 570 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 CMASQ8NFW8 434 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 PJA1Q8NG27 643 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 GPRASP2Q96D09 838 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 MTMR8Q96EF0 704 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms