RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
POLB-208ENST00000520008 APOL5Q9BWW9 433 aa13.23□□□□□ -0.29
POLB-208ENST00000520008 INO80BQ9C086 356 aaPredicted RBP13.23□□□□□ -0.29
POLB-208ENST00000520008 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
POLB-208ENST00000520008 POMKQ9H5K3 350 aa13.23□□□□□ -0.29
POLB-208ENST00000520008 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
POLB-208ENST00000520008 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
POLB-208ENST00000520008 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
POLB-208ENST00000520008 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
POLB-208ENST00000520008 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
POLB-208ENST00000520008 DMDP11532 3685 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 STK36Q9NRP7 1315 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 CARNS1A5YM72 827 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 ZC3H11AO75152 810 aaKnown RBP eCLIP13.22□□□□□ -0.29
POLB-208ENST00000520008 OFD1O75665 1012 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 CTSAP10619 480 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 SKIP12755 728 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 QARSP47897 775 aaKnown RBP13.22□□□□□ -0.29
POLB-208ENST00000520008 RAB27AP51159 221 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
POLB-208ENST00000520008 SCRN1Q12765 414 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 TCF15Q12870 199 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
POLB-208ENST00000520008 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
POLB-208ENST00000520008 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
POLB-208ENST00000520008 HAS1Q92839 578 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 TMEM169Q96HH4 297 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 FAM20AQ96MK3 541 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 NECTIN4Q96NY8 510 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 JPH2Q9BR39 696 aaPredicted RBP13.22□□□□□ -0.29
POLB-208ENST00000520008 VN1R3Q9BXE9 311 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 NRDE2Q9H7Z3 1164 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 KCNJ14Q9UNX9 436 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 PPME1Q9Y570 386 aa13.22□□□□□ -0.29
POLB-208ENST00000520008 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 TBX3O15119 743 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 GALTP07902 379 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 GCFC2P16383 781 aaKnown RBP13.21□□□□□ -0.29
POLB-208ENST00000520008 VCPP55072 806 aaKnown RBP13.21□□□□□ -0.29
POLB-208ENST00000520008 NPEPPSP55786 919 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 SPIRE1Q08AE8 756 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 STK3Q13188 491 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 LETM2Q2VYF4 491 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 NOMO2Q5JPE7 1267 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 GLB1LQ6UWU2 654 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 CATSPER4Q7RTX7 472 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 SUGP1Q8IWZ8 645 aaKnown RBP13.21□□□□□ -0.29
POLB-208ENST00000520008 VPS52Q8N1B4 723 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 NLRP4Q96MN2 994 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 PRRX2Q99811 253 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 MINDY3Q9H8M7 445 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
POLB-208ENST00000520008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.2□□□□□ -0.3
POLB-208ENST00000520008 C2CD4DB7Z1M9 353 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
POLB-208ENST00000520008 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
POLB-208ENST00000520008 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
POLB-208ENST00000520008 PTPN5P54829 565 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 GIT2Q14161 759 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 CES5AQ6NT32 575 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 CPLX2Q6PUV4 134 aaKnown RBP13.2□□□□□ -0.3
POLB-208ENST00000520008 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
POLB-208ENST00000520008 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 C4orf19Q8IY42 314 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 FEZF2Q8TBJ5 459 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 AUTS2Q8WXX7 1259 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 LXNQ9BS40 222 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 DZANK1Q9NVP4 752 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 NR2E1Q9Y466 385 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 PCDHB2Q9Y5E7 798 aa13.2□□□□□ -0.3
POLB-208ENST00000520008 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 INPPL1O15357 1258 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 PFKFB2O60825 505 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
POLB-208ENST00000520008 CDKL5O76039 1030 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 CXCL14O95715 111 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 PDGFBP01127 241 aaPredicted RBP13.19□□□□□ -0.3
POLB-208ENST00000520008 EPCAMP16422 314 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 RFC5P40937 340 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 MTHFRP42898 656 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 SLC11A1P49279 550 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
POLB-208ENST00000520008 EPHA7Q15375 998 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 EARS2Q5JPH6 523 aaKnown RBP13.19□□□□□ -0.3
POLB-208ENST00000520008 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
POLB-208ENST00000520008 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms