RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 SMAD3P84022 425 aaKnown RBP13.1□□□□□ -0.31
HPS4-218ENST00000519774 MAPK7Q13164 816 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
HPS4-218ENST00000519774 NAALADL2Q58DX5 795 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 RESP18Q5W5W9 173 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 RTN4RL1Q86UN2 441 aaPredicted RBP13.1□□□□□ -0.31
HPS4-218ENST00000519774 DAW1Q8N136 415 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 DHX58Q96C10 678 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 REEP2Q9BRK0 252 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
HPS4-218ENST00000519774 KCND2Q9NZV8 630 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 CCDC169A6NNP5 214 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 TLL1O43897 1013 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
HPS4-218ENST00000519774 FAM13AO94988 1023 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 MYOGP15173 224 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 DNAJB2P25686 324 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
HPS4-218ENST00000519774 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
HPS4-218ENST00000519774 PEX3P56589 373 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 POU5F1BQ06416 359 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 DSC3Q14574 896 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 RAB30Q15771 203 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 SV2BQ7L1I2 683 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 NKX2-4Q9H2Z4 354 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 MSRAQ9UJ68 235 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 ADGRA3Q8IWK6 1321 aa13.09□□□□□ -0.31
HPS4-218ENST00000519774 TTC3P53804 2025 aa13.08□□□□□ -0.31
HPS4-218ENST00000519774 POLR2DO15514 142 aaKnown RBP13.08□□□□□ -0.32
HPS4-218ENST00000519774 TSPAN1O60635 241 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 GJB5O95377 273 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 NPTX2P47972 431 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
HPS4-218ENST00000519774 NUBP1P53384 320 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 E2F4Q16254 413 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
HPS4-218ENST00000519774 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 TWF2Q6IBS0 349 aaKnown RBP13.08□□□□□ -0.32
HPS4-218ENST00000519774 DYMQ7RTS9 669 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 STAMQ92783 540 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
HPS4-218ENST00000519774 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 RGS18Q9NS28 235 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 C1orf112Q9NSG2 853 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 LRFN2Q9ULH4 789 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 ODF2LQ9ULJ1 636 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
HPS4-218ENST00000519774 PCDHA11Q9Y5I1 949 aa13.08□□□□□ -0.32
HPS4-218ENST00000519774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
HPS4-218ENST00000519774 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 MYMKA6NI61 221 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 C9IYK1 514 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 B4GALT5O43286 388 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 PRKCBP05771 671 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 CA3P07451 260 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 STAG3L1P0CL83 205 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 PLS3P13797 630 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 PFKFB1P16118 471 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 GIT2Q14161 759 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 SLC24A5Q71RS6 500 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 NPAS4Q8IUM7 802 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 FSIP1Q8NA03 581 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 DDX12PQ92771 950 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 TOP1MTQ969P6 601 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 CUEDC2Q9H467 287 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 PRMT7Q9NVM4 692 aaPredicted RBP13.07□□□□□ -0.32
HPS4-218ENST00000519774 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
HPS4-218ENST00000519774 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
HPS4-218ENST00000519774 LCHNA4D1U4 455 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 GOLGA6L4A6NEF3 574 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 SLC16A4O15374 487 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 IDEP14735 1019 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 ARF4P18085 180 aaPredicted RBP13.06□□□□□ -0.32
HPS4-218ENST00000519774 CMA1P23946 247 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 SMTNP53814 917 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
HPS4-218ENST00000519774 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
HPS4-218ENST00000519774 MAPK6Q16659 721 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 AMHR2Q16671 573 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 NOTUMQ6P988 496 aa13.06□□□□□ -0.32
HPS4-218ENST00000519774 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
HPS4-218ENST00000519774 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms