RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 VWCEQ96DN2 955 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 HOOK2Q96ED9 719 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 C20orf173Q96LM9 149 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 DNAJC7Q99615 494 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 ZNF341Q9BYN7 854 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 TRIM4Q9C037 500 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 CEP44Q9C0F1 390 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 MUC3BQ9H195 1237 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 WNT8AQ9H1J5 351 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 IFT57Q9NWB7 429 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 TLR7Q9NYK1 1049 aaKnown RBP4.18□□□□□ -1.74
CPNE3-204ENST00000517862 FBXL21Q9UKT6 434 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 COL4A3BPQ9Y5P4 624 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 CACNA1EQ15878 2313 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
CPNE3-204ENST00000517862 SPENQ96T58 3664 aaKnown RBP4.17□□□□□ -1.74
CPNE3-204ENST00000517862 CCDC194A0A1B0GVG4 234 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 B2RBV5 119 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 RNMTO43148 476 aaKnown RBP4.17□□□□□ -1.74
CPNE3-204ENST00000517862 CDC45O75419 566 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ASGR2P07307 311 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 DCNP07585 359 aaKnown RBP4.17□□□□□ -1.74
CPNE3-204ENST00000517862 RLBP1P12271 317 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ITPKAP23677 461 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 KCNJ6P48051 423 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ACLYP53396 1101 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 CHMP4BP1P59074 171 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 PLAURQ03405 335 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ADAM15Q13444 863 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 TREML2Q5T2D2 321 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 RNF187Q5TA31 235 aaPredicted RBP4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ADAMTSL4Q6UY14 1074 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 GK5Q6ZS86 529 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 MIGA2Q7L4E1 593 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 DHX32Q7L7V1 743 aaKnown RBP4.17□□□□□ -1.74
CPNE3-204ENST00000517862 SLITRK4Q8IW52 837 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 CEP120Q8N960 986 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ZBTB44Q8NCP5 570 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 STK35Q8TDR2 534 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 FERD3LQ96RJ6 166 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 FAM83CQ9BQN1 747 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 TNKS2Q9H2K2 1166 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 TDRD3Q9H7E2 651 aaKnown RBP4.17□□□□□ -1.74
CPNE3-204ENST00000517862 BRMS1Q9HCU9 246 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ZSCAN32Q9NX65 697 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 CLEC1BQ9P126 229 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 MORF4L1Q9UBU8 362 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 MAPK8IP1Q9UQF2 711 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 USP16Q9Y5T5 823 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 ZHX2Q9Y6X8 837 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 NBEAL2Q6ZNJ1 2754 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 FRMPD4Q14CM0 1322 aa4.17□□□□□ -1.74
CPNE3-204ENST00000517862 RTTNQ86VV8 2226 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 ERVV-1B6SEH8 477 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 H3BNC9 293 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 ARVCFO00192 962 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 PEX10O60683 326 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 CLSTN1O94985 981 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 RARBP10826 455 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 EIF2AK2P19525 551 aaKnown RBP4.16□□□□□ -1.74
CPNE3-204ENST00000517862 SOX18P35713 384 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 CSTF1Q05048 431 aaKnown RBP4.16□□□□□ -1.74
CPNE3-204ENST00000517862 CLCQ05315 142 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 CPSF6Q16630 551 aaKnown RBP eCLIP4.16□□□□□ -1.74
CPNE3-204ENST00000517862 DDR2Q16832 855 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 EPC2Q52LR7 807 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 RUFY4Q6ZNE9 571 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 ZNF34Q8IZ26 560 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 NGEFQ8N5V2 710 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 C12orf50Q8NA57 414 aaPredicted RBP4.16□□□□□ -1.74
CPNE3-204ENST00000517862 GPRC5AQ8NFJ5 357 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 PIP4K2CQ8TBX8 421 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 GRIN3AQ8TCU5 1115 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 NXPE3Q969Y0 559 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 GLT1D1Q96MS3 346 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 RAD9AQ99638 391 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 POLR3GLQ9BT43 218 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 BHLHE41Q9C0J9 482 aaPredicted RBP4.16□□□□□ -1.74
CPNE3-204ENST00000517862 MIR1-1HGQ9H1L0 117 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 ACTR10Q9NZ32 417 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 NAGPAQ9UK23 515 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 NR2E1Q9Y466 385 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 GREB1Q4ZG55 1949 aa4.16□□□□□ -1.74
CPNE3-204ENST00000517862 ARHGEF17Q96PE2 2063 aaPredicted RBP4.15□□□□□ -1.74
CPNE3-204ENST00000517862 FLNAP21333 2647 aaKnown RBP4.15□□□□□ -1.74
CPNE3-204ENST00000517862 FAM221AA4D161 298 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 ZBTB42B2RXF5 422 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PDE2AO00408 941 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 LAMTOR5O43504 91 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 GLRX3O76003 335 aaKnown RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 MAP3K6O95382 1288 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 GHRHP01286 108 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 CD4P01730 458 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 IBSPP21815 317 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 ABCG1P45844 678 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 GIPRP48546 466 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 ANAPC15P60006 121 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 IFRD2Q12894 506 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-204ENST00000517862 SQSTM1Q13501 440 aa4.15□□□□□ -1.75
CPNE3-204ENST00000517862 PLCL1Q15111 1095 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms