RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 LPPQ93052 612 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 PRRX2Q99811 253 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 MRPL9Q9BYD2 267 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 C22orf23Q9BZE7 217 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 ZBP1Q9H171 429 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 POMKQ9H5K3 350 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 NRDE2Q9H7Z3 1164 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 ZSWIM6Q9HCJ5 1215 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 SUCLA2Q9P2R7 463 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 IRAK3Q9Y616 596 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
CTNNA1-203ENST00000517534 DDX11L8A8MPP1 907 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 C2CD4DB7Z1M9 353 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 B4GALT3O60512 393 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 CTSAP10619 480 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 SP100P23497 879 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 ALDH7A1P49419 539 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 PSEN1P49768 467 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 ITIH3Q06033 890 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 RUFY3Q7L099 469 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 ZNF410Q86VK4 478 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 VPS52Q8N1B4 723 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 C12orf76Q8N812 135 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 DAGLBQ8NCG7 672 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 KREMEN2Q8NCW0 462 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 SLC22A17Q8WUG5 538 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 AUTS2Q8WXX7 1259 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 RSPH1Q8WYR4 309 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 TMEM169Q96HH4 297 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 IGSF21Q96ID5 467 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 VN1R3Q9BXE9 311 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 IFT122Q9HBG6 1241 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 TBC1D13Q9NVG8 400 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 NR2E1Q9Y466 385 aa9.38□□□□□ -0.91
CTNNA1-203ENST00000517534 SLC37A4O43826 429 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 LILRB3O75022 631 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 ZC3H11AO75152 810 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 DEXIO95424 95 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 BRD1O95696 1058 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 WEE2P0C1S8 567 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 SKIP12755 728 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 EPCAMP16422 314 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 HOXA11P31270 313 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 SLC11A1P49279 550 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 DNM2P50570 870 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 POLGP54098 1239 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 NPEPPSP55786 919 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 PSMC5P62195 406 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 NOMO2Q5JPE7 1267 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 UBXN11Q5T124 520 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 PLA2G4FQ68DD2 849 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 TWF2Q6IBS0 349 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 CES5AQ6NT32 575 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 MRPL10Q7Z7H8 261 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 DDX53Q86TM3 631 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 RHPN2Q8IUC4 686 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 ZNF274Q96GC6 653 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 INO80BQ9C086 356 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 SMOC2Q9H3U7 446 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 KCNMB3Q9NPA1 279 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 CYP26B1Q9NR63 512 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 WRAP73Q9P2S5 460 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 DNAJB4Q9UDY4 337 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 DDX25Q9UHL0 483 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 VAV3Q9UKW4 847 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 PIN4Q9Y237 131 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 VPS13AQ96RL7 3174 aa9.37□□□□□ -0.91
CTNNA1-203ENST00000517534 SPTBN4Q9H254 2564 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 MAP3K13O43283 966 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 DDHD2O94830 711 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 REC8O95072 547 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 MTHFRP42898 656 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 QARSP47897 775 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 PPP2R5CQ13362 524 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 NONOQ15233 471 aaKnown RBP eCLIP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 PTPN14Q15678 1187 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 INF2Q27J81 1249 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 ATAT1Q5SQI0 421 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms