RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 TRIM4Q9C037 500 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 TUT1Q9H6E5 874 aaKnown RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 ELAC1Q9H777 363 aaKnown RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 SH2D4AQ9H788 454 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 GPCPD1Q9NPB8 672 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 ENTPD7Q9NQZ7 604 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 SNRKQ9NRH2 765 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 STARD5Q9NSY2 213 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 RBM12Q9NTZ6 932 aaKnown RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 POLR3BQ9NW08 1133 aaPredicted RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 C9orf78Q9NZ63 289 aaPredicted RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 SPG21Q9NZD8 308 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 SWAP70Q9UH65 585 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 PUF60Q9UHX1 559 aaKnown RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 FEM1BQ9UK73 627 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 ZFP37Q9Y6Q3 630 aaPredicted RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 FRMPD4Q14CM0 1322 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 ZBED9Q6R2W3 1325 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 RAD50Q92878 1312 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 IGSF9BQ9UPX0 1349 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 KDM3AQ9Y4C1 1321 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 NSD1Q96L73 2696 aaPredicted RBP2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 ARID2Q68CP9 1835 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 ANK1P16157 1881 aa2.82□□□□□ -1.96
RNU1-48P-201ENST00000516400 TCRBV5S4A2TA0A5A2 114 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 WIPF3A6NGB9 483 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TBKBP1A7MCY6 615 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 B4E1Z4 1266 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 NT5C1B-RDH14C9J2C7 533 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 BHMG1C9JSJ3 638 aaPredicted RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 MPHOSPH10O00566 681 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 INPPL1O15357 1258 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ECI2O75521 394 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ZMYND10O75800 440 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CFBP00751 764 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ICAM1P05362 532 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 STAG3L1P0CL83 205 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 RNF224P0DH78 156 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 FGFR1P11362 822 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ALAS1P13196 640 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 LAG3P18627 525 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 RASA1P20936 1047 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 NOVP48745 357 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 SLC4A3P48751 1232 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 PXNP49023 591 aaPredicted RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 POLGP54098 1239 aaPredicted RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CHMP4BP1P59074 171 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 SNAP25P60880 206 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 RPS6P62753 249 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 PFKPQ01813 784 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TFCP2Q12800 502 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 LAMC2Q13753 1193 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 GIT2Q14161 759 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TESK1Q15569 626 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TRIP6Q15654 476 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 SMAD1Q15797 465 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 LINC00303Q3SY05 128 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CLLU1OSQ5K130 101 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CELF3Q5SZQ8 465 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 PMS2CLQ68D20 193 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 HEATR6Q6AI08 1181 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TANGO2Q6ICL3 276 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ZNF746Q6NUN9 644 aaPredicted RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 SLC23A3Q6PIS1 610 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 BTNL9Q6UXG8 535 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 SLC24A5Q71RS6 500 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 KRT25Q7Z3Z0 450 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 VPS52Q8N1B4 723 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 MIGA1Q8NAN2 632 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 RGS22Q8NE09 1264 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 GMCL1P1Q8NEA9 526 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 SNIP1Q8TAD8 396 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 HDAC7Q8WUI4 952 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TMEM40Q8WWA1 233 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 DNASE1L2Q92874 299 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 KIFC2Q96AC6 838 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ZBTB10Q96DT7 871 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 IGSF21Q96ID5 467 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CHMP4AQ9BY43 222 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 PCGF6Q9BYE7 350 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 TRIM34Q9BYJ4 488 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 KRTAP17-1Q9BYP8 105 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 PRKD2Q9BZL6 878 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 RANBP17Q9H2T7 1088 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ANTXR1Q9H6X2 564 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CDHR5Q9HBB8 845 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 RXFP1Q9HBX9 757 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CAPN10Q9HC96 672 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ZNF334Q9HCZ1 680 aaPredicted RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 GOPCQ9HD26 462 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 DNAAF2Q9NVR5 837 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 LRP2BPQ9P2M1 347 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ADD3Q9UEY8 706 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CDH7Q9ULB5 785 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 PAXBP1Q9Y5B6 917 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 CDY2AQ9Y6F7 541 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 OBSL1O75147 1896 aa2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 ANK3Q12955 4377 aaKnown RBP2.81□□□□□ -1.96
RNU1-48P-201ENST00000516400 JMJD1CQ15652 2540 aa2.8□□□□□ -1.96
RNU1-48P-201ENST00000516400 SHANK1Q9Y566 2161 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms