RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 PPARAQ07869 468 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 ATP13A4Q4VNC1 1196 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 CCDC62Q6P9F0 684 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 HDGFL2Q7Z4V5 671 aaPredicted RBP4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 RNF180Q86T96 592 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 CDYL2Q8N8U2 506 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 ZNF341Q9BYN7 854 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 ANO3Q9BYT9 981 aa4.57□□□□□ -1.68
SNORA40.12-201ENST00000516329 FSBPO95073 299 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 JUNP05412 331 aaKnown RBP4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 GAAP10253 952 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 BPIP17213 487 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 HSD3B2P26439 372 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 DGCR2P98153 550 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 CRHR2Q13324 411 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 DHCR24Q15392 516 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 MAN2A1Q16706 1144 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 GAGE13Q4V321 117 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 SPTY2D1Q68D10 685 aaPredicted RBP4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 CRIP3Q6Q6R5 217 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 FRMD7Q6ZUT3 714 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 DDX46Q7L014 1031 aaKnown RBP4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 STRA8Q7Z7C7 330 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 Q8N1X5 172 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 PIK3C3Q8NEB9 887 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 ARL8AQ96BM9 186 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 TCF25Q9BQ70 676 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 FDXACB1Q9BRP7 624 aaPredicted RBP4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 CSRNP2Q9H175 543 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 ING3Q9NXR8 418 aa4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 NOC2LQ9Y3T9 749 aaKnown RBP4.56□□□□□ -1.68
SNORA40.12-201ENST00000516329 ALDH1A2O94788 518 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 LY86O95711 162 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 C1SP09871 688 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 SOX5P35711 763 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 KIR2DL3P43628 341 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 MANFP55145 182 aaKnown RBP4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 CD69Q07108 199 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 MGAT5Q09328 741 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 ELAVL1Q15717 326 aaKnown RBP4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 FAM214AQ32MH5 1076 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 FAM111BQ6SJ93 734 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 MB21D1Q8N884 522 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 GAB3Q8WWW8 586 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 MPHOSPH9Q99550 1183 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 TTC1Q99614 292 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 OSBPL6Q9BZF3 934 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 SCAND2PQ9GZW5 306 aaPredicted RBP4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 PRDM12Q9H4Q4 367 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 GIT1Q9Y2X7 761 aa4.55□□□□□ -1.68
SNORA40.12-201ENST00000516329 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 PLSCR1O15162 318 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 CYP27B1O15528 508 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 AKAP8O43823 692 aaKnown RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 STC2O76061 302 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 SEC24DO94855 1032 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 LPLP06858 475 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 XPAP23025 273 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 NPEPPSP55786 919 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 FOXE3Q13461 319 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 TRIM25Q14258 630 aaKnown RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 CT83Q5H943 113 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 CT47A1Q5JQC4 288 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 FKBP15Q5T1M5 1219 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 LMBR1LQ6UX01 489 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 Q6ZRM9 215 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 ELOA2Q8IYF1 753 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 UNC5BQ8IZJ1 945 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 ANKRD35Q8N283 1001 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 CLRN3Q8NCR9 226 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 CHAC2Q8WUX2 184 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 PGBD4Q96DM1 585 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 PLEKHG4BQ96PX9 1271 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 CAAP1Q9H8G2 361 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 TOPORSQ9NS56 1045 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 EDARQ9UNE0 448 aa4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 APOBEC2Q9Y235 224 aaKnown RBP4.54□□□□□ -1.68
SNORA40.12-201ENST00000516329 MTSS1O43312 755 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 NRP2O60462 931 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 CFBP00751 764 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 GDF5P43026 501 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 MASP1P48740 699 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 SCNN1GP51170 649 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 NRG3P56975 720 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 PTH1RQ03431 593 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 SPIDRQ14159 915 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 RRP1BQ14684 758 aaKnown RBP4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 PDCD1Q15116 288 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 PITRM1Q5JRX3 1037 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 RASSF3Q86WH2 238 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 LYSMD2Q8IV50 215 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 CMTM4Q8IZR5 234 aa4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 THEMISQ8N1K5 641 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 MSL3Q8N5Y2 521 aaKnown RBP4.53□□□□□ -1.68
SNORA40.12-201ENST00000516329 PPP1R14CQ8TAE6 165 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms