RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
SERF1B-208ENST00000515588 PLVAPQ9BX97 442 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 TMEM117Q9H0C3 514 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 POLD4Q9HCU8 107 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 FAM105AQ9NUU6 356 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
SERF1B-208ENST00000515588 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 STK24Q9Y6E0 443 aa17.48■□□□□ 0.39
SERF1B-208ENST00000515588 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 E9PMD0 336 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 TSPAN1O60635 241 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 ZNF623O75123 536 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 TFDP1Q14186 410 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
SERF1B-208ENST00000515588 AMHR2Q16671 573 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 UBXN11Q5T124 520 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 LPPQ93052 612 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 PNMA5Q96PV4 448 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 NFKBIZQ9BYH8 718 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 CWH43Q9H720 699 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 ALG13Q9NP73 1137 aaKnown RBP17.47■□□□□ 0.39
SERF1B-208ENST00000515588 PLAGL2Q9UPG8 496 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 KIAA1671Q9BY89 1806 aa17.47■□□□□ 0.39
SERF1B-208ENST00000515588 BRWD1Q9NSI6 2320 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 INO80B-WBP1J3KQ70 363 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 HOXA2O43364 376 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 EYA4O95677 639 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 ITGB1P05556 798 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 GRIN1Q05586 938 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 CAMK1Q14012 370 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 HYIQ5T013 277 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 KLHL23Q8NBE8 558 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 HELQQ8TDG4 1101 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 DNM3Q9UQ16 869 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 PCDHB2Q9Y5E7 798 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 CLIC4Q9Y696 253 aa17.46■□□□□ 0.39
SERF1B-208ENST00000515588 LRRIQ4A6NIV6 560 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 B4GALT5O43286 388 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 DNAJB1P25685 340 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 PTPAQ15257 358 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 PCBP1Q15365 356 aaKnown RBP eCLIP17.45■□□□□ 0.38
SERF1B-208ENST00000515588 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
SERF1B-208ENST00000515588 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
SERF1B-208ENST00000515588 PTPROQ16827 1216 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 CDCA2Q69YH5 1023 aaPredicted RBP17.45■□□□□ 0.38
SERF1B-208ENST00000515588 HSCBQ8IWL3 235 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 SPPL3Q8TCT6 385 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 P2RX5Q93086 422 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 CPB2Q96IY4 423 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 PLIN2Q99541 437 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 RUSC1Q9BVN2 902 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 THEGQ9P2T0 379 aa17.45■□□□□ 0.38
SERF1B-208ENST00000515588 CUL9Q8IWT3 2517 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 STX6O43752 255 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 ERLIN2O94905 339 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 BMP15O95972 392 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 SKIP12755 728 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 ARF4P18085 180 aaPredicted RBP17.44■□□□□ 0.38
SERF1B-208ENST00000515588 RAB27AP51159 221 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 TFF2Q03403 129 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 NAALADL2Q58DX5 795 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 SPOUT1Q5T280 376 aaKnown RBP17.44■□□□□ 0.38
SERF1B-208ENST00000515588 AGMOQ6ZNB7 445 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 MRPL10Q7Z7H8 261 aaKnown RBP17.44■□□□□ 0.38
SERF1B-208ENST00000515588 ABI1Q8IZP0 508 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 COLGALT1Q8NBJ5 622 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 EIF2AQ9BY44 585 aaKnown RBP17.44■□□□□ 0.38
SERF1B-208ENST00000515588 LMAN2LQ9H0V9 348 aa17.44■□□□□ 0.38
SERF1B-208ENST00000515588 TTLL13PA6NNM8 815 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 OFD1O75665 1012 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 CSPG5O95196 566 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 AXLP30530 894 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 PBX3P40426 434 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 TMEM119Q4V9L6 283 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 RINT1Q6NUQ1 792 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 CABP7Q86V35 215 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 DAW1Q8N136 415 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 LRRC43Q8N309 656 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 SMG8Q8ND04 991 aaKnown RBP17.43■□□□□ 0.38
SERF1B-208ENST00000515588 LRRC15Q8TF66 581 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 KIFC3Q9BVG8 833 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 FZD8Q9H461 694 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 PCDHB12Q9Y5F1 795 aa17.43■□□□□ 0.38
SERF1B-208ENST00000515588 TTC28Q96AY4 2481 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 LAG3P18627 525 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 NAMPTP43490 491 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 AFF1P51825 1210 aaKnown RBP17.42■□□□□ 0.38
SERF1B-208ENST00000515588 MAPK7Q13164 816 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 TIGD5Q53EQ6 642 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 TCEAL5Q5H9L2 206 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 CDR2LQ86X02 465 aaPredicted RBP17.42■□□□□ 0.38
SERF1B-208ENST00000515588 ATXN2LQ8WWM7 1075 aaKnown RBP17.42■□□□□ 0.38
SERF1B-208ENST00000515588 KIFAP3Q92845 792 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 CCDC51Q96ER9 411 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 AK8Q96MA6 479 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 CCDC113Q9H0I3 377 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms