RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 POF1BQ8WVV4 589 aa10.11□□□□□ -0.79
CDC42SE2-212ENST00000515533 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
CDC42SE2-212ENST00000515533 AGO4Q9HCK5 861 aaKnown RBP10.11□□□□□ -0.79
CDC42SE2-212ENST00000515533 POLMQ9NP87 494 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE2-212ENST00000515533 TCEAL9Q9UHQ7 104 aa10.11□□□□□ -0.79
CDC42SE2-212ENST00000515533 CD207Q9UJ71 328 aa10.11□□□□□ -0.79
CDC42SE2-212ENST00000515533 DENND3A2RUS2 1198 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 STXBP3O00186 592 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 MEIS1O00470 390 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 LINC01565O15544 149 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 HBP1O60381 514 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 RPS6KA5O75582 802 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 KLRC1P26715 233 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 SREBF1P36956 1147 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 NRIP1P48552 1158 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 SARSP49591 514 aaKnown RBP10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 ITGB3BPQ13352 177 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 ADAM15Q13444 863 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 CAMK1Q14012 370 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 TMEM266Q2M3C6 531 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 MTHFD1LQ6UB35 978 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 LYPD4Q6UWN0 246 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 FAM43BQ6ZT52 329 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 SPPL3Q8TCT6 385 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 ATP8B4Q8TF62 1192 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 TCEANC2Q96MN5 208 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 ZNF302Q9NR11 478 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 NAP1L2Q9ULW6 460 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 PCDHB7Q9Y5E2 793 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 COL1A2P08123 1366 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
CDC42SE2-212ENST00000515533 KRTAP9-6A0A140TA67 174 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 GOLGA8AA7E2F4 631 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 GOLGA8BA8MQT2 603 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 GPR182O15218 404 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 ATG7O95352 703 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 DNAJB1P25685 340 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 GATMP50440 423 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 FGD1P98174 961 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 MIS18BP1Q6P0N0 1132 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 DHX32Q7L7V1 743 aaKnown RBP10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 CCDC60Q8IWA6 550 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 CKAP2LQ8IYA6 745 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 EFHBQ8N7U6 833 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 MICAL1Q8TDZ2 1067 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 KCNH6Q9H252 994 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 C1orf112Q9NSG2 853 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 TMEM260Q9NX78 707 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 BARHL2Q9NY43 387 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 MUTYHQ9UIF7 546 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 USP34Q70CQ2 3546 aa10.09□□□□□ -0.79
CDC42SE2-212ENST00000515533 IGKV6D-21A0A0A0MT36 114 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 KLF18A0A0U1RQI7 1052 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 FSD2A1L4K1 749 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 TBKBP1A7MCY6 615 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 IPO5O00410 1097 aaKnown RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 CCNE2O96020 404 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 SETQ01105 290 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 UBE3AQ05086 875 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 SRSF11Q05519 484 aaKnown RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 KRT32Q14532 448 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 HERC4Q5GLZ8 1057 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 JAKMIP3Q5VZ66 844 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 MCTP2Q6DN12 878 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 SWSAP1Q6NVH7 229 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ABHD15Q6UXT9 468 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 SLC24A5Q71RS6 500 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 NIPA1Q7RTP0 329 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ADGRD2Q7Z7M1 963 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ALYREFQ86V81 257 aaKnown RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 THNSL1Q8IYQ7 743 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 METTL13Q8N6R0 699 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 SMRP1Q8NCR6 262 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 CCDC12Q8WUD4 166 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 MSLNLQ96KJ4 702 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 MFSD14AQ96MC6 490 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ADAM2Q99965 735 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 TMX1Q9H3N1 280 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 TLE6Q9H808 572 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ERVK-5Q9HDB9 667 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 TLR9Q9NR96 1032 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 RGS18Q9NS28 235 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 BRPF3Q9ULD4 1205 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 ST3GAL5Q9UNP4 418 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 CEP131Q9UPN4 1083 aa10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 NOC2LQ9Y3T9 749 aaKnown RBP10.08□□□□□ -0.8
CDC42SE2-212ENST00000515533 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 FAM86B1E9PN63 330 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 MGEA5O60502 916 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 EYA4O95677 639 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 FAM86B2P0C5J1 330 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms