RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	FAM105A	Q9NUU6	356 aa		13.79	□□□□□ -0.2
CDK18-223	ENST00000515514	FAM205C	A6NFA0	338 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	PER2	O15055	1255 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	ZNF623	O75123	536 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	SMC1A	Q14683	1233 aa	Known RBP	13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	TMEM184A	Q6ZMB5	413 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	OTUD6A	Q7L8S5	288 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	SRGAP1	Q7Z6B7	1085 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	KSR1	Q8IVT5	923 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	NECAB1	Q8N987	351 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	SUSD6	Q92537	303 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	FAM122A	Q96E09	287 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	C5orf42	Q9H799	3197 aa		13.78	□□□□□ -0.2
CDK18-223	ENST00000515514	LOC730098	B7Z3J9	87 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	NEMF	O60524	1076 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	DTNB	O60941	627 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	LYPLA2	O95372	231 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	ALDH7A1	P49419	539 aa	Known RBP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	BCAR1	P56945	870 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	RBM10	P98175	930 aa	Known RBP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	CYP4A11	Q02928	519 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	TRIM29	Q14134	588 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	CBX2	Q14781	532 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	TMC7	Q7Z402	723 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	RNF135	Q8IUD6	432 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	DIS3L2	Q8IYB7	885 aa	Known RBP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	ZNF579	Q8NAF0	562 aa	Known RBP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	TMEM143	Q96AN5	459 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	PGBD4	Q96DM1	585 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	TMEM169	Q96HH4	297 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	DYDC2	Q96IM9	177 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	PHF7	Q9BWX1	381 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	RGL1	Q9NZL6	768 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	CNTNAP2	Q9UHC6	1331 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	MUTYH	Q9UIF7	546 aa		13.77	□□□□□ -0.21
CDK18-223	ENST00000515514	HIDE1	A8MVS5	230 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	ASAP2	O43150	1006 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	HOXB8	P17481	243 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	NEK4	P51957	841 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	LAMTOR4	Q0VGL1	99 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	CTTN	Q14247	550 aa	Known RBP	13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	BMS1	Q14692	1282 aa	Known RBP	13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	CALCRL	Q16602	461 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	XKR9	Q5GH70	373 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	NOMO2	Q5JPE7	1267 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	ANKRD54	Q6NXT1	300 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	FERMT3	Q86UX7	667 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	RNF149	Q8NC42	400 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	PRPF31	Q8WWY3	499 aa	Known RBP	13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	CASP10	Q92851	521 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	LPP	Q93052	612 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	MTR	Q99707	1265 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	ZBP1	Q9H171	429 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	TBC1D13	Q9NVG8	400 aa		13.76	□□□□□ -0.21
CDK18-223	ENST00000515514	C2orf71	A6NGG8	1288 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	JAK2	O60674	1132 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	ERLIN2	O94905	339 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	TEC	P42680	631 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	RNASEL	Q05823	741 aa	Known RBP	13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	ST3GAL1	Q11201	340 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	MXD4	Q14582	209 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	MRPL43	Q8N983	215 aa	Known RBP	13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	URGCP	Q8TCY9	931 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	CCDC51	Q96ER9	411 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	MINDY3	Q9H8M7	445 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	XPNPEP1	Q9NQW7	623 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	STK39	Q9UEW8	545 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	PCDHA12	Q9UN75	941 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	INPP5F	Q9Y2H2	1132 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	PCDHB2	Q9Y5E7	798 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	HCFC2	Q9Y5Z7	792 aa		13.75	□□□□□ -0.21
CDK18-223	ENST00000515514	MEIS3P2	A8K0S8	358 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	BTBD18	B2RXH4	712 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	OFD1	O75665	1012 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	DGAT1	O75907	488 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	SLITRK3	O94933	977 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	SRGAP2C	P0DJJ0	459 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	HOXA11	P31270	313 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	GIT2	Q14161	759 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	TFDP1	Q14186	410 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	TPRN	Q4KMQ1	711 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	SYCE2	Q6PIF2	218 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	AGMO	Q6ZNB7	445 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	MRPL10	Q7Z7H8	261 aa	Known RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	DDX53	Q86TM3	631 aa	Known RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	TMEM173	Q86WV6	379 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	TPH2	Q8IWU9	490 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	CNNM3	Q8NE01	707 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	IGSF21	Q96ID5	467 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	CCDC43	Q96MW1	224 aa	Known RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	HSD17B14	Q9BPX1	270 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	S1PR5	Q9H228	398 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	NRDE2	Q9H7Z3	1164 aa		13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	TTC12	Q9H892	705 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK18-223	ENST00000515514	RSAD1	Q9HA92	442 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms