RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CLCN3P51790 818 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 ALCAMQ13740 583 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 CAPSQ13938 189 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 EFCAB12Q6NXP0 572 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 SAAL1Q96ER3 474 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 APBA2Q99767 749 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 BAG1Q99933 345 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-213ENST00000515418 TUT1Q9H6E5 874 aaKnown RBP10.02□□□□□ -0.81
CPNE4-213ENST00000515418 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 HSPBP1Q9NZL4 362 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 ARHGAP28Q9P2N2 729 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 GNEQ9Y223 722 aaKnown RBP10.02□□□□□ -0.81
CPNE4-213ENST00000515418 FRMD4BQ9Y2L6 1034 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 ZNF236Q9UL36 1845 aa10.02□□□□□ -0.81
CPNE4-213ENST00000515418 TTLL13PA6NNM8 815 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 K7ERI5 159 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 ALDH1A1P00352 501 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 IGHA2P01877 340 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 EDN1P05305 212 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 XRCC5P13010 732 aaKnown RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 KLRC1P26715 233 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 FCGRTP55899 365 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 DLG4P78352 724 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 BEX3Q00994 111 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 LAMTOR4Q0VGL1 99 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TRIM32Q13049 653 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 MTF1Q14872 753 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 NFIL3Q16649 462 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 DGKDQ16760 1214 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 RHPN2Q8IUC4 686 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 MAP4K3Q8IVH8 894 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 DEPTORQ8TB45 409 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 GOLGA5Q8TBA6 731 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SLC35C1Q96A29 364 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 ZBTB45Q96K62 511 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 PPP1R16BQ96T49 567 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SUCLA2Q9P2R7 463 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 CAPN11Q9UMQ6 739 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 LUC7L2Q9Y383 392 aaKnown RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TRIP12Q14669 1992 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 IGKV6-21A0A0C4DH24 114 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SOWAHDA6NJG2 315 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 HNRNPDLO14979 420 aaKnown RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TPM1P09493 284 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TRIM49P0CI25 452 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TRIM49CP0CI26 452 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 ACTN1P12814 892 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SLC9A1P19634 815 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 NAMPTP43490 491 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 PRKCZQ05513 592 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 IER5Q5VY09 327 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TLK2Q86UE8 772 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SLC17A8Q8NDX2 589 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 SOCS4Q8WXH5 440 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TRIB2Q92519 343 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 BICD1Q96G01 975 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 PANX2Q96RD6 677 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 TTYH3Q9C0H2 523 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 ABHD10Q9NUJ1 306 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 RNF186Q9NXI6 227 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 FAM184BQ9ULE4 1060 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
CPNE4-213ENST00000515418 A6NJR5 290 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 CSDE1O75534 798 aaKnown RBP10□□□□□ -0.81
CPNE4-213ENST00000515418 NOL4O94818 638 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 C22orf31O95567 290 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 AFPP02771 609 aaKnown RBP10□□□□□ -0.81
CPNE4-213ENST00000515418 VEGFBP49765 207 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 SP3Q02447 781 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 PPP2R5AQ15172 486 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 E4F1Q66K89 784 aaPredicted RBP10□□□□□ -0.81
CPNE4-213ENST00000515418 CBWD2Q8IUF1 395 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 CNGA4Q8IV77 575 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 XXYLT1Q8NBI6 393 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 RNF149Q8NC42 400 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 PLEKHO2Q8TD55 490 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 PSPC1Q8WXF1 523 aaKnown RBP10□□□□□ -0.81
CPNE4-213ENST00000515418 POMGNT1Q8WZA1 660 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 CHP1Q99653 195 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 METTL14Q9HCE5 456 aaKnown RBP10□□□□□ -0.81
CPNE4-213ENST00000515418 NLRC4Q9NPP4 1024 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 SETD4Q9NVD3 440 aa10□□□□□ -0.81
CPNE4-213ENST00000515418 ADCY3O60266 1144 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 STX10O60499 249 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 ADRB2P07550 413 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 HOXD8P13378 290 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 ELNP15502 786 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CLCN1P35523 988 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 STRN3Q13033 797 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 BRDTQ58F21 947 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 ZNF484Q5JVG2 852 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MARCH8Q5T0T0 291 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 RAD9BQ6WBX8 426 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 TOGARAM2Q6ZUX3 1019 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 OR8K1Q8NGG5 319 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 KAT2BQ92831 832 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms