RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ORC2Q13416 577 aaPredicted RBP12.77□□□□□ -0.37
VCAN-212ENST00000515397 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 UBXN11Q5T124 520 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 PADI6Q6TGC4 694 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.37
VCAN-212ENST00000515397 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 IGSF22Q8N9C0 903 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 POF1BQ8WVV4 589 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 ATXN2LQ8WWM7 1075 aaKnown RBP12.77□□□□□ -0.37
VCAN-212ENST00000515397 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 HLA-CQ95604 372 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.37
VCAN-212ENST00000515397 TMEM117Q9H0C3 514 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 BHMT2Q9H2M3 363 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 DACT1Q9NYF0 836 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 DBR1Q9UK59 544 aaKnown RBP12.77□□□□□ -0.37
VCAN-212ENST00000515397 PPME1Q9Y570 386 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 PCDHB2Q9Y5E7 798 aa12.77□□□□□ -0.37
VCAN-212ENST00000515397 VWA3AA6NCI4 1184 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
VCAN-212ENST00000515397 KCNA5P22460 613 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 GRIN1Q05586 938 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 PDIA5Q14554 519 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
VCAN-212ENST00000515397 RILPL1Q5EBL4 403 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 ADGRD2Q7Z7M1 963 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 THNSL1Q8IYQ7 743 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 MMTAG2Q9BU76 263 aaKnown RBP12.76□□□□□ -0.37
VCAN-212ENST00000515397 KIFC3Q9BVG8 833 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 APOL6Q9BWW8 343 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 GBP3Q9H0R5 595 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 AGPAT5Q9NUQ2 364 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 FAM105AQ9NUU6 356 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 RWDD3Q9Y3V2 267 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 HES2Q9Y543 173 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
VCAN-212ENST00000515397 PER2O15055 1255 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 LINC01565O15544 149 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 GAS2O43903 313 aaKnown RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 TSPAN1O60635 241 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 FGF18O76093 207 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 ERLIN2O94905 339 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 EOMESO95936 686 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 BMP1P13497 986 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 CYP11B2P19099 503 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 SYT1P21579 422 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 ERVFC1P60507 584 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 TFDP1Q14186 410 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 CLUL1Q15846 466 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 AMHR2Q16671 573 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 KRT79Q5XKE5 535 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 AGMOQ6ZNB7 445 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
VCAN-212ENST00000515397 NSUN3Q9H649 340 aaKnown RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 UBE2ZQ9H832 354 aaPredicted RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
VCAN-212ENST00000515397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 SFI1A8K8P3 1242 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 K7ELQ4 463 aaPredicted RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 B4GALT3O60512 393 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 OFD1O75665 1012 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 SSBP05455 408 aaKnown RBP eCLIP12.74□□□□□ -0.37
VCAN-212ENST00000515397 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 CEBPZQ03701 1054 aaKnown RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 DLX2Q07687 328 aaPredicted RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 HYAL1Q12794 435 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 TIGD5Q53EQ6 642 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 HAUS3Q68CZ6 603 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 KCNT2Q6UVM3 1135 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 ZNF280BQ86YH2 543 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 SMG8Q8ND04 991 aaKnown RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 P2RX5Q93086 422 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 RUSC1Q9BVN2 902 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
VCAN-212ENST00000515397 CLDND1Q9NY35 253 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 DNM3Q9UQ16 869 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 NCOR1O75376 2440 aa12.74□□□□□ -0.37
VCAN-212ENST00000515397 NPHP3-ACAD11A0A0J9YXS1 232 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 LAD1O00515 517 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 HOXA2O43364 376 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 ZNF623O75123 536 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 ZC3H11AO75152 810 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms