RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 LRRC8DQ7L1W4 858 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 ZNF720Q7Z2F6 126 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 HAUS6Q7Z4H7 955 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 SRGAP1Q7Z6B7 1085 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 PPP1R16BQ96T49 567 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 MAN1B1Q9UKM7 699 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 SQORQ9Y6N5 450 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 K7ENM7 598 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 LETM1O95202 739 aaPredicted RBP23.12■■□□□ 1.29
LSM6-207ENST00000515311 DARSP14868 501 aaKnown RBP23.12■■□□□ 1.29
LSM6-207ENST00000515311 EIF4BP23588 611 aaKnown RBP23.12■■□□□ 1.29
LSM6-207ENST00000515311 PCBP1Q15365 356 aaKnown RBP eCLIP23.12■■□□□ 1.29
LSM6-207ENST00000515311 ZNF658Q5TYW1 1059 aaPredicted RBP23.12■■□□□ 1.29
LSM6-207ENST00000515311 STXBP4Q6ZWJ1 553 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 HPS3Q969F9 1004 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 HVCN1Q96D96 273 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 OSMRQ99650 979 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 KIFC3Q9BVG8 833 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 STRA6Q9BX79 667 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 INO80BQ9C086 356 aaPredicted RBP23.12■■□□□ 1.29
LSM6-207ENST00000515311 TMEM134Q9H6X4 195 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 CDHR5Q9HBB8 845 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 TBC1D7Q9P0N9 293 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 GINS2Q9Y248 185 aa23.12■■□□□ 1.29
LSM6-207ENST00000515311 PPP1R37O75864 691 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 PARNO95453 639 aaKnown RBP23.11■■□□□ 1.29
LSM6-207ENST00000515311 NMT1P30419 496 aaKnown RBP23.11■■□□□ 1.29
LSM6-207ENST00000515311 GTF2BQ00403 316 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 MBTD1Q05BQ5 628 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 STK4Q13043 487 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 MORC3Q14149 939 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 EPM2AIP1Q7L775 607 aaPredicted RBP23.11■■□□□ 1.29
LSM6-207ENST00000515311 USP38Q8NB14 1042 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 ZNF668Q96K58 619 aaPredicted RBP23.11■■□□□ 1.29
LSM6-207ENST00000515311 CCDC113Q9H0I3 377 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 PCDHB13Q9Y5F0 798 aa23.11■■□□□ 1.29
LSM6-207ENST00000515311 UBE4BO95155 1302 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 DENND3A2RUS2 1198 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 EIF3DO15371 548 aaKnown RBP eCLIP23.1■■□□□ 1.29
LSM6-207ENST00000515311 GCNT3O95395 438 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 CASP5P51878 434 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 KIAA0895Q8NCT3 520 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 TMEM40Q8WWA1 233 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 MINDY3Q9H8M7 445 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 SLC39A2Q9NP94 309 aa23.1■■□□□ 1.29
LSM6-207ENST00000515311 K7ERI5 159 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 TIMP1P01033 207 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 IQCF3P0C7M6 154 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 MYBP10242 640 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 MAPK6Q16659 721 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 FAM187BQ17R55 369 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 COBLL1Q53SF7 1204 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 FBXO47Q5MNV8 452 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 GLIS3Q8NEA6 775 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 PRIMPOLQ96LW4 560 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 FGFBP2Q9BYJ0 223 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 WNT8AQ9H1J5 351 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 FZD8Q9H461 694 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 PRDM5Q9NQX1 630 aaPredicted RBP23.09■■□□□ 1.29
LSM6-207ENST00000515311 TBX20Q9UMR3 447 aa23.09■■□□□ 1.29
LSM6-207ENST00000515311 UMODL1Q5DID0 1318 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 TRIM43BA6NCK2 446 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 INO80B-WBP1J3KQ70 363 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 BIN1O00499 593 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 EVI5O60447 810 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 SFPQP23246 707 aaKnown RBP eCLIP23.08■■□□□ 1.29
LSM6-207ENST00000515311 CYP2C18P33260 490 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 STRN3Q13033 797 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 LPIN1Q14693 890 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 MBTPS1Q14703 1052 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 BMT2Q1RMZ1 405 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 ZC2HC1CQ53FD0 456 aaPredicted RBP23.08■■□□□ 1.29
LSM6-207ENST00000515311 TSHZ1Q6ZSZ6 1077 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 TAS1R3Q7RTX0 852 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 ZNF507Q8TCN5 953 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 TRIM43Q96BQ3 446 aaPredicted RBP23.08■■□□□ 1.29
LSM6-207ENST00000515311 PPP1R12CQ9BZL4 782 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 PRMT7Q9NVM4 692 aaPredicted RBP23.08■■□□□ 1.29
LSM6-207ENST00000515311 GDAQ9Y2T3 454 aa23.08■■□□□ 1.29
LSM6-207ENST00000515311 LTBP2Q14767 1821 aa23.08■■□□□ 1.28
LSM6-207ENST00000515311 KIF20AO95235 890 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 PRKCBP05771 671 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 RAG1P15918 1043 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 BMP6P22004 513 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 RFC2P35250 354 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 ZSCAN23Q3MJ62 389 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 L1TD1Q5T7N2 865 aaKnown RBP23.07■■□□□ 1.28
LSM6-207ENST00000515311 FAM43BQ6ZT52 329 aaPredicted RBP23.07■■□□□ 1.28
LSM6-207ENST00000515311 MAP4K3Q8IVH8 894 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 C7orf61Q8IZ16 206 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 MYOCDQ8IZQ8 938 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 GUF1Q8N442 669 aaKnown RBP23.07■■□□□ 1.28
LSM6-207ENST00000515311 SCFD1Q8WVM8 642 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 PRKAG2Q9UGJ0 569 aa23.07■■□□□ 1.28
LSM6-207ENST00000515311 NOC2LQ9Y3T9 749 aaKnown RBP23.07■■□□□ 1.28
LSM6-207ENST00000515311 SCN5AQ14524 2016 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 ACKR2O00590 384 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 RPS6KA5O75582 802 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 ERLIN2O94905 339 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 PPP1R2P41236 205 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms