RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 TUBB2BQ9BVA1 445 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 SMARCAD1Q9H4L7 1026 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 ADAMTS1Q9UHI8 967 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 ESRRBO95718 433 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 ALCAMQ13740 583 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 FAM102AQ5T9C2 384 aaPredicted RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 CDR2LQ86X02 465 aaPredicted RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 ASMTLO95671 621 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 DNAJB2P25686 324 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 ZNF34Q8IZ26 560 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 TRMT2AQ8IZ69 625 aaKnown RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 KLHL11Q9NVR0 708 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 MSH2P43246 934 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 RESTQ13127 1097 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 NBPF12Q5TAG4 269 aaPredicted RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 ATXN7L3BQ96GX2 97 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 FGD4Q96M96 766 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 ZNF512Q96ME7 567 aaPredicted RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 BAG5Q9UL15 447 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 UBA6A0AVT1 1052 aaPredicted RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 PSMC1P62191 440 aaKnown RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 KCNH2Q12809 1159 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 DUOXA2Q1HG44 320 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 E5RI56 91 aa15.39■□□□□ 0.05
TRIO-222ENST00000515144 TAL1P17542 331 aaPredicted RBP15.39■□□□□ 0.05
TRIO-222ENST00000515144 LMNB2Q03252 620 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 KNOP1Q1ED39 458 aaKnown RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 FAM20AQ96MK3 541 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 GFPT1Q06210 699 aaPredicted RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 ATG4CQ96DT6 458 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 RPAP1Q9BWH6 1393 aaPredicted RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 PLS3P13797 630 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 LPAR1Q92633 364 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 PBXIP1Q96AQ6 731 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 CCDC85CA6NKD9 419 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 ZNF286BP0CG31 522 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 PPP1R13BQ96KQ4 1090 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 CLCA2Q9UQC9 943 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 ALDH1A1P00352 501 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 RALAP11233 206 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 PCK1P35558 622 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 LRRC8CQ8TDW0 803 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 MUC3BQ9H195 1237 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 DHX35Q9H5Z1 703 aaKnown RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 NDFIP2Q9NV92 336 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 EMSYQ7Z589 1322 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 CITO14578 2027 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 GRAP2O75791 330 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 VTNP04004 478 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 KCNV1Q6PIU1 500 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 FBXO16Q8IX29 292 aaPredicted RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 GLIS2Q9BZE0 524 aaPredicted RBP15.38■□□□□ 0.05
TRIO-222ENST00000515144 AGAP1Q9UPQ3 857 aa15.38■□□□□ 0.05
TRIO-222ENST00000515144 FAM47DPA6NHR8 397 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 ADM5C9JUS6 153 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 NTSR2O95665 410 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 ITGA4P13612 1032 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 CEP55Q53EZ4 464 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 GLT1D1Q96MS3 346 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 PDHBP11177 359 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 ALDH7A1P49419 539 aaKnown RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 ZKSCAN8Q15776 578 aaPredicted RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 GINM1Q9NU53 330 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 CNOT8Q9UFF9 292 aaKnown RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 SNX9Q9Y5X1 595 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 OAS2P29728 719 aaKnown RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 KRT31Q15323 416 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 KIFC3Q9BVG8 833 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 ZCWPW1Q9H0M4 648 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 ITM2BQ9Y287 266 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 DAAM1Q9Y4D1 1078 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 ALDH1A3P47895 512 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 BBS9Q3SYG4 887 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 C11orf70Q9BRQ4 267 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 THAP9Q9H5L6 903 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 STRIP2Q9ULQ0 834 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 EIF3CLB5ME19 914 aaKnown RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 MAP3K7O43318 606 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 SYF2O95926 243 aaKnown RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 SERPIND1P05546 499 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 B4GALNT4Q76KP1 1039 aa15.37■□□□□ 0.05
TRIO-222ENST00000515144 EIF3CQ99613 913 aaKnown RBP15.37■□□□□ 0.05
TRIO-222ENST00000515144 ACSL3O95573 720 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 APPL2Q8NEU8 664 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 RMDN1Q96DB5 314 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 CPB2Q96IY4 423 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 GPC4O75487 556 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 TUBBP07437 444 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 TMEM132DQ14C87 1099 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms