RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 NOD1Q9Y239 953 aa17.55■□□□□ 0.4
TRIM41-206ENST00000514219 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
TRIM41-206ENST00000514219 XIRP2A4UGR9 3374 aa17.55■□□□□ 0.4
TRIM41-206ENST00000514219 NCOR1O75376 2440 aa17.55■□□□□ 0.4
TRIM41-206ENST00000514219 MBLAC1A4D2B0 266 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-206ENST00000514219 CAND2O75155 1236 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 RPL13P26373 211 aaKnown RBP17.54■□□□□ 0.4
TRIM41-206ENST00000514219 CASP1P29466 404 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 IGBP1P78318 339 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 BMT2Q1RMZ1 405 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 CCSAPQ6IQ19 270 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-206ENST00000514219 APBB1IPQ7Z5R6 666 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-206ENST00000514219 ADSSL1Q8N142 457 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 CCDC155Q8N6L0 562 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 LMBR1Q8WVP7 490 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 ERCC4Q92889 916 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-206ENST00000514219 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 STARD7Q9NQZ5 370 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 SUCLA2Q9P2R7 463 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-206ENST00000514219 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 AKT3Q9Y243 479 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 TELO2Q9Y4R8 837 aa17.54■□□□□ 0.4
TRIM41-206ENST00000514219 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 A0A087WWV3 80 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 TMEM150BA6NC51 233 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 ZBTB42B2RXF5 422 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 CALUO43852 315 aaPredicted RBP17.53■□□□□ 0.4
TRIM41-206ENST00000514219 ARL2P36404 184 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 NCKAP1LP55160 1127 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 PEX3P56589 373 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 CHMP4BP1P59074 171 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
TRIM41-206ENST00000514219 MAPK7Q13164 816 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 GSE1Q14687 1217 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 GRIN2CQ14957 1233 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 TRIM60Q495X7 471 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 SLC39A5Q6ZMH5 540 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 MAEAQ7L5Y9 396 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 ZNF720Q7Z2F6 126 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 SYCP3Q8IZU3 236 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 ACCSQ96QU6 501 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 CEP89Q96ST8 783 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 SLC39A2Q9NP94 309 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 XPNPEP1Q9NQW7 623 aa17.53■□□□□ 0.4
TRIM41-206ENST00000514219 LRRIQ4A6NIV6 560 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 KIAA0391O15091 583 aaKnown RBP17.52■□□□□ 0.4
TRIM41-206ENST00000514219 TPM2P07951 284 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 CYP2C9P11712 490 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 CCNE1P24864 410 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 HOXC8P31273 242 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 NPTX2P47972 431 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 SPAG1Q07617 926 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 STK4Q13043 487 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 ITGA7Q13683 1181 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 KNOP1Q1ED39 458 aaKnown RBP17.52■□□□□ 0.4
TRIM41-206ENST00000514219 UVSSAQ2YD98 709 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 EDRF1Q3B7T1 1238 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 HAUS6Q7Z4H7 955 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 ENOX1Q8TC92 643 aaKnown RBP17.52■□□□□ 0.4
TRIM41-206ENST00000514219 TMEM134Q9H6X4 195 aa17.52■□□□□ 0.4
TRIM41-206ENST00000514219 A0A1W2PQ45 241 aaPredicted RBP17.51■□□□□ 0.39
TRIM41-206ENST00000514219 A0A1W2PQY0 241 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 TRIM43BA6NCK2 446 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 MYADML2A6NDP7 307 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 RSPH10B2B2RC85 870 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 PDXKO00764 312 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 RSPH10BP0C881 870 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 PRCPP42785 496 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 GTF2BQ00403 316 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
TRIM41-206ENST00000514219 LAMTOR4Q0VGL1 99 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 MYBPC2Q14324 1141 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 SNX17Q15036 470 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 ISM2Q6H9L7 571 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 RHPN2Q8IUC4 686 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 DAW1Q8N136 415 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 KIAA0895Q8NCT3 520 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 ZNF507Q8TCN5 953 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 PRPF31Q8WWY3 499 aaKnown RBP17.51■□□□□ 0.39
TRIM41-206ENST00000514219 NELFBQ8WX92 580 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 P2RX5Q93086 422 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 TRIM43Q96BQ3 446 aaPredicted RBP17.51■□□□□ 0.39
TRIM41-206ENST00000514219 RNPC3Q96LT9 517 aaKnown RBP17.51■□□□□ 0.39
TRIM41-206ENST00000514219 SH2D3AQ9BRG2 576 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 TYW1Q9NV66 732 aaKnown RBP17.51■□□□□ 0.39
TRIM41-206ENST00000514219 SETD4Q9NVD3 440 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 HDAC6Q9UBN7 1215 aa17.51■□□□□ 0.39
TRIM41-206ENST00000514219 CHD9Q3L8U1 2897 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 K7ERI5 159 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 TLR3O15455 904 aaKnown RBP17.5■□□□□ 0.39
TRIM41-206ENST00000514219 GNA14O95837 355 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 TPM3P06753 285 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 MAPK6Q16659 721 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 SPATA1Q5VX52 437 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms