RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PEX3P56589 373 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 POU5F1BQ06416 359 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 LAMTOR4Q0VGL1 99 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 ALCAMQ13740 583 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM240Q5SV17 173 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 MFSD5Q6N075 450 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 CAVIN1Q6NZI2 390 aaKnown RBP11.2□□□□□ -0.62
NEDD9-214ENST00000513989 SASS6Q6UVJ0 657 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF410Q86VK4 478 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 PPP1R13LQ8WUF5 828 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 DNAJC19Q96DA6 116 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 VWCEQ96DN2 955 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 NTPCRQ9BSD7 190 aaKnown RBP11.2□□□□□ -0.62
NEDD9-214ENST00000513989 GCOM2Q9BZD3 368 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-214ENST00000513989 MRPL44Q9H9J2 332 aaKnown RBP11.2□□□□□ -0.62
NEDD9-214ENST00000513989 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 XPNPEP1Q9NQW7 623 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 PCDHA5Q9Y5H7 936 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 LRRIQ4A6NIV6 560 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 GRXCR1A8MXD5 290 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 PARNO95453 639 aaKnown RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 DNAJB2P25686 324 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 PPP1R2P41236 205 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 NPTX2P47972 431 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 CRYBB1P53674 252 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 NLRP11P59045 1033 aaKnown RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 STRN3Q13033 797 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 STIM1Q13586 685 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 GRIN2CQ14957 1233 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 PCBP1Q15365 356 aaKnown RBP eCLIP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 KMT5BQ4FZB7 885 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 NT5DC1Q5TFE4 455 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 RUFY4Q6ZNE9 571 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 FAM43BQ6ZT52 329 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 TRIML1Q8N9V2 468 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 RNF149Q8NC42 400 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 MAFAQ8NHW3 353 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-214ENST00000513989 POLD4Q9HCU8 107 aa11.19□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM265A0A087WTH1 108 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 RSPH10B2B2RC85 870 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 K7ERI5 159 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 VTNP04004 478 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 RSPH10BP0C881 870 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 ACRP10323 421 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 GLRA2P23416 452 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 CASP1P29466 404 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 CYP2C18P33260 490 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 PBX2P40425 430 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 SARSP49591 514 aaKnown RBP11.18□□□□□ -0.62
NEDD9-214ENST00000513989 MRPS6P82932 125 aaKnown RBP11.18□□□□□ -0.62
NEDD9-214ENST00000513989 COASYQ13057 564 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 HIC1Q14526 733 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 FAM26FQ5R3K3 315 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF720Q7Z2F6 126 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 SRGAP1Q7Z6B7 1085 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 LINC01465Q8N7H1 131 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 USP38Q8NB14 1042 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 SPATA20Q8TB22 786 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 ZBTB10Q96DT7 871 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 NLRP4Q96MN2 994 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 NFKBIZQ9BYH8 718 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 CELF4Q9BZC1 486 aaKnown RBP11.18□□□□□ -0.62
NEDD9-214ENST00000513989 PPP1R12CQ9BZL4 782 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 OLFML3Q9NRN5 406 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
NEDD9-214ENST00000513989 DACH1Q9UI36 760 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 EXOC7Q9UPT5 735 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 GINS2Q9Y248 185 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 TRPV2Q9Y5S1 764 aa11.18□□□□□ -0.62
NEDD9-214ENST00000513989 DOCK5Q9H7D0 1870 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-214ENST00000513989 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-214ENST00000513989 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 SLC16A4O15374 487 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 GCNT3O95395 438 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 CKBP12277 381 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 EIF4BP23588 611 aaKnown RBP11.17□□□□□ -0.62
NEDD9-214ENST00000513989 GPC3P51654 580 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 PTENP60484 403 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM62Q0P6H9 643 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 MAPK7Q13164 816 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 PPIGQ13427 754 aaKnown RBP eCLIP11.17□□□□□ -0.62
NEDD9-214ENST00000513989 DRP2Q13474 957 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 MAPK6Q16659 721 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 KIZQ2M2Z5 673 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF658Q5TYW1 1059 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF365Q70YC5 407 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 HAUS6Q7Z4H7 955 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 SFR1Q86XK3 245 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 DAW1Q8N136 415 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms