RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SNAI1O95863 264 aaPredicted RBP10.86□□□□□ -0.67
TPM3-221ENST00000513769 TCF7P36402 384 aaPredicted RBP10.86□□□□□ -0.67
TPM3-221ENST00000513769 PBX1P40424 430 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 KCNJ6P48051 423 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 CDC42EP1Q00587 391 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 POU5F1BQ06416 359 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 ENPEPQ07075 957 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 TBC1D8BQ0IIM8 1120 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 MAPK7Q13164 816 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 ACVR2BQ13705 512 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 DUSP28Q4G0W2 176 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 FIGNQ5HY92 759 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 CCDC60Q8IWA6 550 aaPredicted RBP10.86□□□□□ -0.67
TPM3-221ENST00000513769 FAM160A2Q8N612 972 aaPredicted RBP10.86□□□□□ -0.67
TPM3-221ENST00000513769 SPC24Q8NBT2 197 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 SOCS4Q8WXH5 440 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 SLC7A3Q8WY07 619 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 ACCSQ96QU6 501 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 ERGIC2Q96RQ1 377 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 GBP3Q9H0R5 595 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 R3HDMLQ9H3Y0 253 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 DMAC2Q9NW81 257 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 SAGE1Q9NXZ1 904 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 ERAP1Q9NZ08 941 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 KIAA1217Q5T5P2 1943 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 TRIM49BA6NDI0 452 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 KIAA0391O15091 583 aaKnown RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 SLC16A3O15427 465 aaKnown RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 MAGEB2O15479 319 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 ZNF500O60304 480 aaPredicted RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 STX10O60499 249 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 MAFO75444 373 aaPredicted RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 IGHA2P01877 340 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 ATP4AP20648 1035 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 RGS2P41220 211 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 NCKAP1LP55160 1127 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 SOX10P56693 466 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PRR20EP86478 221 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PRR20CP86479 221 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PRR20DP86480 221 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PRR20BP86481 221 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PRR20AP86496 221 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 UBXN1Q04323 297 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 RAD51AP2Q09MP3 1159 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 LRRC41Q15345 812 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 UGCGQ16739 394 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 BRDTQ58F21 947 aaPredicted RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 FKBP15Q5T1M5 1219 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 IER5Q5VY09 327 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 BRICD5Q6PL45 260 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 HAUS6Q7Z4H7 955 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PPFIBP1Q86W92 1011 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 DAW1Q8N136 415 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 HPS3Q969F9 1004 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 SPATA33Q96N06 139 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 NOC4LQ9BVI4 516 aaKnown RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 NAA15Q9BXJ9 866 aaKnown RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 KATNBL1Q9H079 304 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 BCAS3Q9H6U6 928 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 ATP6V0A4Q9HBG4 840 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 PRDM9Q9NQV7 894 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 KCND1Q9NSA2 647 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 RNF186Q9NXI6 227 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 TBC1D7Q9P0N9 293 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 CPA4Q9UI42 421 aa10.85□□□□□ -0.67
TPM3-221ENST00000513769 FCF1Q9Y324 198 aaKnown RBP10.85□□□□□ -0.67
TPM3-221ENST00000513769 IGKV6-21A0A0C4DH24 114 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 LGALS16A8MUM7 142 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 RSPH10B2B2RC85 870 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 TGFB1I1O43294 461 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 PRPF6O94906 941 aaKnown RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 GNRH1P01148 92 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 TUBB4AP04350 444 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 RSPH10BP0C881 870 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 HOXD8P13378 290 aaPredicted RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 SFPQP23246 707 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM3-221ENST00000513769 HOXD13P35453 343 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 PSMC2P35998 433 aaKnown RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 ARL2P36404 184 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 NPEPPSP55786 919 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 PRKCEQ02156 737 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 DMP1Q13316 513 aaPredicted RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 HSDL1Q3SXM5 330 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 ZNF484Q5JVG2 852 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 UTP14CQ5TAP6 766 aaKnown RBP10.84□□□□□ -0.67
TPM3-221ENST00000513769 LRRC55Q6ZSA7 311 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 EEPD1Q7L9B9 569 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 TMC6Q7Z403 805 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 CREBRFQ8IUR6 639 aa10.84□□□□□ -0.67
TPM3-221ENST00000513769 CNGA4Q8IV77 575 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 714.1 ms