RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 NPAS4Q8IUM7 802 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 GJD3Q8N144 294 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 CLP1Q92989 425 aaKnown RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 LRFN3Q9BTN0 628 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 FTHL17Q9BXU8 183 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 CELF4Q9BZC1 486 aaKnown RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 C11orf16Q9NQ32 467 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 PADI3Q9ULW8 664 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 GINS2Q9Y248 185 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 MRPL42Q9Y6G3 142 aaKnown RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 IGLV3-22A0A075B6J6 115 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 IGKV6D-21A0A0A0MT36 114 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 ADAMTS3O15072 1205 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 HBP1O60381 514 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 MMP1P03956 469 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 KLRC1P26715 233 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 GATMP50440 423 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 SMTNP53814 917 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 SETQ01105 290 aaPredicted RBP10.52□□□□□ -0.73
CDK7-210ENST00000513629 COL19A1Q14993 1142 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 TLR1Q15399 786 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 MIS18BP1Q6P0N0 1132 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 ABHD15Q6UXT9 468 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 Q6ZUG5 572 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 NIPA1Q7RTP0 329 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 RTN4RL1Q86UN2 441 aaPredicted RBP10.52□□□□□ -0.73
CDK7-210ENST00000513629 CMTR2Q8IYT2 770 aaKnown RBP10.52□□□□□ -0.73
CDK7-210ENST00000513629 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 BRF1Q92994 677 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 PPP1R16BQ96T49 567 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 LMAN2LQ9H0V9 348 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 TMX1Q9H3N1 280 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 ZNF302Q9NR11 478 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 SQORQ9Y6N5 450 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 KDM3AQ9Y4C1 1321 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 NID2Q14112 1375 aa10.52□□□□□ -0.73
CDK7-210ENST00000513629 CCDC196A0A1B0GTZ2 297 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 A6NJY4 79 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 PI4K2BG5E9Z4 385 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 DHX15O43143 795 aaKnown RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 STAG3L1P0CL83 205 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 GTF2F1P35269 517 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDK7-210ENST00000513629 PLA2G5P39877 138 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 CTSOP43234 321 aaPredicted RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 CENPCQ03188 943 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 HYAL1Q12794 435 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 NFX1Q12986 1120 aaKnown RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 CLUL1Q15846 466 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 SWSAP1Q6NVH7 229 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 BLOC1S2Q6QNY1 142 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 TRMT1LQ7Z2T5 733 aaKnown RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 REXO1Q8N1G1 1221 aaKnown RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 RASGRP4Q8TDF6 673 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 CCDC12Q8WUD4 166 aaPredicted RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 TMEM40Q8WWA1 233 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 CRYGNQ8WXF5 182 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 PHKBQ93100 1093 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 ZNF577Q9BSK1 485 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 TRAIPQ9BWF2 469 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 PLVAPQ9BX97 442 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 ZMYND12Q9H0C1 365 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 C6orf50Q9HD87 102 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 ALG13Q9NP73 1137 aaKnown RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 POLMQ9NP87 494 aaPredicted RBP10.51□□□□□ -0.73
CDK7-210ENST00000513629 TCEAL9Q9UHQ7 104 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 PLAGL2Q9UPG8 496 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 SNX14Q9Y5W7 946 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 COL1A2P08123 1366 aa10.51□□□□□ -0.73
CDK7-210ENST00000513629 KIAA1671Q9BY89 1806 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 ZBTB42B2RXF5 422 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 NCK2O43639 380 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 MGEA5O60502 916 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 TBX10O75333 385 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 RPS6KA5O75582 802 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 CYP3A4P08684 503 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
CDK7-210ENST00000513629 ATP4AP20648 1035 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 DNAJB1P25685 340 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 HSPA4P34932 840 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 LTBRP36941 435 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 ZP2Q05996 745 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 DLX2Q07687 328 aaPredicted RBP10.5□□□□□ -0.73
CDK7-210ENST00000513629 PKN1Q16512 942 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 PRR16Q569H4 304 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 CKAP2LQ8IYA6 745 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 KIAA0319LQ8IZA0 1049 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 NME8Q8N427 588 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 KLHL23Q8NBE8 558 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 KCNB2Q92953 911 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 FAM122AQ96E09 287 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 OSMRQ99650 979 aa10.5□□□□□ -0.73
CDK7-210ENST00000513629 IGFLR1Q9H665 355 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms