RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PRKCIP41743 596 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 FMO5P49326 533 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 BFSP1Q12934 665 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 LAMC2Q13753 1193 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 GRB14Q14449 540 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 MTERF2Q49AM1 385 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 SLC9C1Q4G0N8 1177 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 SFMBT2Q5VUG0 894 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 CST9Q5W186 159 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 HGSNATQ68CP4 663 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 SYT10Q6XYQ8 523 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 RRAGAQ7L523 313 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 MAEAQ7L5Y9 396 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 KSR1Q8IVT5 923 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 DHX37Q8IY37 1157 aaKnown RBP9.14□□□□□ -0.95
RNF4-220ENST00000513578 TXLNBQ8N3L3 684 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 CCDC155Q8N6L0 562 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 TCP11Q8WWU5 503 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 BSNDQ8WZ55 320 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 JPH2Q9BR39 696 aaPredicted RBP9.14□□□□□ -0.95
RNF4-220ENST00000513578 DESI2Q9BSY9 194 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 KATNBL1Q9H079 304 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 AZI2Q9H6S1 392 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 KIAA1586Q9HCI6 787 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 SIX2Q9NPC8 291 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 ARHGAP20Q9P2F6 1191 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 BZW2Q9Y6E2 419 aaKnown RBP9.14□□□□□ -0.95
RNF4-220ENST00000513578 MGAMO43451 1857 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 UQCRHLA0A096LP55 91 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 MANSC4A6NHS7 340 aaPredicted RBP9.13□□□□□ -0.95
RNF4-220ENST00000513578 SLC15A5A6NIM6 579 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 CCDC169A6NNP5 214 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 KIF5CO60282 957 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 GFPT2O94808 682 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 IPO7O95373 1038 aaKnown RBP9.13□□□□□ -0.95
RNF4-220ENST00000513578 UQCRHP07919 91 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 UCHL3P15374 230 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 SLC9A1P19634 815 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 ADORA2AP29274 412 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 GTF2H1P32780 548 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 CYP2J2P51589 502 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 VAV2P52735 878 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 POLGP54098 1239 aaPredicted RBP9.13□□□□□ -0.95
RNF4-220ENST00000513578 JAM2P57087 298 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 INHBEP58166 350 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 POLR2FP61218 127 aaKnown RBP9.13□□□□□ -0.95
RNF4-220ENST00000513578 LY6KQ17RY6 165 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 ARHGAP29Q52LW3 1261 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 IER5Q5VY09 327 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 TAPT1Q6NXT6 567 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 ARMCX2Q7L311 632 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 ANKRD13CQ8N6S4 541 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 EHBP1Q8NDI1 1231 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 ACRBPQ8NEB7 543 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 ATP8B4Q8TF62 1192 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 SLC7A3Q8WY07 619 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 CCDC42Q96M95 316 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 MFSD14AQ96MC6 490 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 PTPN18Q99952 460 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 TSGA10Q9BZW7 698 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 POLR3FQ9H1D9 316 aaPredicted RBP9.13□□□□□ -0.95
RNF4-220ENST00000513578 IKZF4Q9H2S9 585 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 SMARCAD1Q9H4L7 1026 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 DNAI1Q9UI46 699 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 IVNS1ABPQ9Y6Y0 642 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 KAT6AQ92794 2004 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 EVPLQ92817 2033 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 MYH10P35580 1976 aa9.13□□□□□ -0.95
RNF4-220ENST00000513578 DOCK3Q8IZD9 2030 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 ADGRA3Q8IWK6 1321 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 ANKRD63C9JTQ0 380 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 KRT86O43790 486 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 HBP1O60381 514 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 TLR2O60603 784 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 GH1P01241 217 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 TXNP10599 105 aaKnown RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 HOXD8P13378 290 aaPredicted RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 GLRA2P23416 452 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 ADSSP30520 456 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 CASQ1P31415 396 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 EIF4A3P38919 411 aaKnown RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 VAMP7P51809 220 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 KIF11P52732 1056 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 EFNA5P52803 228 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 GNG11P61952 73 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 SP4Q02446 784 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 CETN1Q12798 172 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 SPA17Q15506 151 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 HSDL1Q3SXM5 330 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 DCAF17Q5H9S7 520 aaPredicted RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 C1orf220Q5T0J3 134 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms