RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 CCDC8Q9H0W5 538 aaPredicted RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 ABHD16BQ9H3Z7 469 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 DCP1AQ9NPI6 582 aaPredicted RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 HOMER2Q9NSB8 354 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 SMC4Q9NTJ3 1288 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 MCM9Q9NXL9 1143 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 PPT2Q9UMR5 302 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 POLR3KQ9Y2Y1 108 aaPredicted RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 PCDHB14Q9Y5E9 798 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 RIF1Q5UIP0 2472 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 F8W735 103 aaPredicted RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 KRT37O76014 449 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 STK10O94804 968 aaKnown RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 IQCF3P0C7M6 154 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 ERVK-21P61565 698 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 NRG1Q02297 640 aaPredicted RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 CLCQ05315 142 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 RING1Q06587 406 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 SOX4Q06945 474 aaPredicted RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 PDE4BQ07343 736 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 DLX2Q07687 328 aaPredicted RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 RBL2Q08999 1139 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 ANKRD34AQ69YU3 496 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 TAPT1Q6NXT6 567 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 FDX2Q6P4F2 183 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 SHISA2Q6UWI4 295 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 C12orf40Q86WS4 652 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 C12orf50Q8NA57 414 aaPredicted RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.75□□□□□ -1.49
HTT-211ENST00000513326 CHMP4CQ96CF2 233 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 CTAGE1Q96RT6 745 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 CRBNQ96SW2 442 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 SLF1Q9BQI6 1058 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 FTOQ9C0B1 505 aaKnown RBP eCLIP5.75□□□□□ -1.49
HTT-211ENST00000513326 KCNH6Q9H252 994 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 AKTIPQ9H8T0 292 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 ARMT1Q9H993 441 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 SPC25Q9HBM1 224 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 CRIM1Q9NZV1 1036 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 CACNA1GO43497 2377 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 GREB1LQ9C091 1923 aaPredicted RBP5.75□□□□□ -1.49
HTT-211ENST00000513326 GVINP1Q7Z2Y8 2422 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 NCOR2Q9Y618 2525 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 SCN10AQ9Y5Y9 1956 aa5.75□□□□□ -1.49
HTT-211ENST00000513326 FAM186AA6NE01 2351 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 TCRBV5S4A2TA0A5A2 114 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 PRAMEF27A3QJZ7 478 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 FAM181BA6NEQ2 426 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 C9orf172C9J069 976 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 FANCGO15287 622 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 TMPRSS2O15393 492 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 HTR3BO95264 441 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 TIAF1O95411 115 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 NDUFB10O96000 172 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 PFKMP08237 780 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 MYL3P08590 195 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 ADH5P11766 374 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 PDE6AP16499 860 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 COL8A1P27658 744 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 LTBRP36941 435 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 SNAP25P60880 206 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 PURAQ00577 322 aaKnown RBP5.74□□□□□ -1.49
HTT-211ENST00000513326 TCEAL5Q5H9L2 206 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 FAM47CQ5HY64 1035 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 FBXW10Q5XX13 1052 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 EP400NLQ6ZTU2 488 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 RASGRP2Q7LDG7 609 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 ASCL5Q7RTU5 278 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 ANKRD35Q8N283 1001 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 FAM133AQ8N9E0 248 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 OR6P1Q8NGX9 317 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 PHOSPHO2Q8TCD6 241 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 EAF2Q96CJ1 260 aaPredicted RBP5.74□□□□□ -1.49
HTT-211ENST00000513326 SHDQ96IW2 340 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 ZNF512BQ96KM6 892 aaPredicted RBP5.74□□□□□ -1.49
HTT-211ENST00000513326 ATXN3LQ9H3M9 355 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 AP4E1Q9UPM8 1137 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 HIF3AQ9Y2N7 669 aa5.74□□□□□ -1.49
HTT-211ENST00000513326 TRIP12Q14669 1992 aaPredicted RBP5.74□□□□□ -1.49
HTT-211ENST00000513326 EPG5Q9HCE0 2579 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 TMEM221A6NGB7 291 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 M0R296 226 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 NBNO60934 754 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 BCAR3O75815 825 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 CABYRO75952 493 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 CSPG5O95196 566 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 GJB5O95377 273 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 ARP10275 920 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 ACTN1P12814 892 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 GIPRP48546 466 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 ETF1P62495 437 aaKnown RBP5.73□□□□□ -1.49
HTT-211ENST00000513326 G3BP1Q13283 466 aaKnown RBP eCLIP5.73□□□□□ -1.49
HTT-211ENST00000513326 LRRFIP1Q32MZ4 808 aaKnown RBP5.73□□□□□ -1.49
HTT-211ENST00000513326 HERC4Q5GLZ8 1057 aaPredicted RBP5.73□□□□□ -1.49
HTT-211ENST00000513326 CCDC158Q5M9N0 1113 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 ZBTB37Q5TC79 503 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
HTT-211ENST00000513326 CCDC81Q6ZN84 652 aa5.73□□□□□ -1.49
HTT-211ENST00000513326 ADHFE1Q8IWW8 467 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms