RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 HCFC2Q9Y5Z7 792 aa28.26■■■□□ 2.11
CLDND1-226ENST00000513287 PFKFB2O60825 505 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 RFC5P40937 340 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 EPHA7Q15375 998 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 SRGAP1Q7Z6B7 1085 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 PGBD4Q96DM1 585 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 LARP6Q9BRS8 491 aaKnown RBP28.25■■■□□ 2.11
CLDND1-226ENST00000513287 SLKQ9H2G2 1235 aaPredicted RBP28.25■■■□□ 2.11
CLDND1-226ENST00000513287 ADAM7Q9H2U9 754 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 AGPAT5Q9NUQ2 364 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 KCNJ14Q9UNX9 436 aa28.25■■■□□ 2.11
CLDND1-226ENST00000513287 PIN4Q9Y237 131 aaKnown RBP28.25■■■□□ 2.11
CLDND1-226ENST00000513287 WDFY4Q6ZS81 3184 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 ASAP2O43150 1006 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 PCBP1Q15365 356 aaKnown RBP eCLIP28.24■■■□□ 2.11
CLDND1-226ENST00000513287 NOMO2Q5JPE7 1267 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 CATSPER4Q7RTX7 472 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 MRPL10Q7Z7H8 261 aaKnown RBP28.24■■■□□ 2.11
CLDND1-226ENST00000513287 HAS1Q92839 578 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 PBXIP1Q96AQ6 731 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 IGSF21Q96ID5 467 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 SH2D3AQ9BRG2 576 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 ZBP1Q9H171 429 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 NR2E1Q9Y466 385 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 COL4A3BPQ9Y5P4 624 aa28.24■■■□□ 2.11
CLDND1-226ENST00000513287 CLASP2O75122 1294 aaKnown RBP28.23■■■□□ 2.11
CLDND1-226ENST00000513287 OFD1O75665 1012 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 CTSAP10619 480 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 ANAPC15P60006 121 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 CES5AQ6NT32 575 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 OTUD6AQ7L8S5 288 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 NRDE2Q9H7Z3 1164 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 TBC1D13Q9NVG8 400 aa28.23■■■□□ 2.11
CLDND1-226ENST00000513287 CXCL14O95715 111 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 GALTP07902 379 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 PTPN21Q16825 1174 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 KSR1Q8IVT5 923 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 SLFN12Q8IYM2 578 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 VPS52Q8N1B4 723 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 TCP11Q8WWU5 503 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 PSPC1Q8WXF1 523 aaKnown RBP28.22■■■□□ 2.11
CLDND1-226ENST00000513287 WASF1Q92558 559 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 CEP170P1Q96L14 293 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 NLRP4Q96MN2 994 aa28.22■■■□□ 2.11
CLDND1-226ENST00000513287 NPEPPSP55786 919 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 ANKRD1Q15327 319 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 PLA2G4FQ68DD2 849 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 LLGL2Q6P1M3 1020 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 ALYREFQ86V81 257 aaKnown RBP28.21■■■□□ 2.11
CLDND1-226ENST00000513287 FBXL6Q8N531 539 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 PRPF31Q8WWY3 499 aaKnown RBP28.21■■■□□ 2.11
CLDND1-226ENST00000513287 ASIC4Q96FT7 647 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 DZANK1Q9NVP4 752 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 KANSL3Q9P2N6 904 aa28.21■■■□□ 2.11
CLDND1-226ENST00000513287 CNTNAP2Q9UHC6 1331 aa28.2■■■□□ 2.11
CLDND1-226ENST00000513287 NT5C1B-RDH14C9J2C7 533 aa28.2■■■□□ 2.1
CLDND1-226ENST00000513287 CCNT1O60563 726 aaKnown RBP28.2■■■□□ 2.1
CLDND1-226ENST00000513287 ZC3H11AO75152 810 aaKnown RBP eCLIP28.2■■■□□ 2.1
CLDND1-226ENST00000513287 MTHFRP42898 656 aa28.2■■■□□ 2.1
CLDND1-226ENST00000513287 SPIRE1Q08AE8 756 aa28.2■■■□□ 2.1
CLDND1-226ENST00000513287 ZSWIM4Q9H7M6 989 aa28.2■■■□□ 2.1
CLDND1-226ENST00000513287 WRAP73Q9P2S5 460 aaPredicted RBP28.2■■■□□ 2.1
CLDND1-226ENST00000513287 TPCN1Q9ULQ1 816 aa28.2■■■□□ 2.1
CLDND1-226ENST00000513287 PCDHB2Q9Y5E7 798 aa28.2■■■□□ 2.1
CLDND1-226ENST00000513287 BAG4O95429 457 aaKnown RBP28.19■■■□□ 2.1
CLDND1-226ENST00000513287 HOXA11P31270 313 aaPredicted RBP28.19■■■□□ 2.1
CLDND1-226ENST00000513287 YWHABP31946 246 aaKnown RBP28.19■■■□□ 2.1
CLDND1-226ENST00000513287 POU5F1BQ06416 359 aa28.19■■■□□ 2.1
CLDND1-226ENST00000513287 PIK3AP1Q6ZUJ8 805 aa28.19■■■□□ 2.1
CLDND1-226ENST00000513287 PPFIBP1Q86W92 1011 aa28.19■■■□□ 2.1
CLDND1-226ENST00000513287 SUGP1Q8IWZ8 645 aaKnown RBP28.19■■■□□ 2.1
CLDND1-226ENST00000513287 CNNM3Q8NE01 707 aa28.19■■■□□ 2.1
CLDND1-226ENST00000513287 LPPQ93052 612 aa28.19■■■□□ 2.1
CLDND1-226ENST00000513287 LXNQ9BS40 222 aa28.19■■■□□ 2.1
CLDND1-226ENST00000513287 RNASELQ05823 741 aaKnown RBP28.18■■■□□ 2.1
CLDND1-226ENST00000513287 LAMTOR4Q0VGL1 99 aa28.18■■■□□ 2.1
CLDND1-226ENST00000513287 AGMOQ6ZNB7 445 aa28.18■■■□□ 2.1
CLDND1-226ENST00000513287 TMEM173Q86WV6 379 aaPredicted RBP28.18■■■□□ 2.1
CLDND1-226ENST00000513287 ZNF579Q8NAF0 562 aaKnown RBP28.18■■■□□ 2.1
CLDND1-226ENST00000513287 RIPOR3Q96MK2 946 aa28.18■■■□□ 2.1
CLDND1-226ENST00000513287 TMEM175Q9BSA9 504 aa28.18■■■□□ 2.1
CLDND1-226ENST00000513287 UBN1Q9NPG3 1134 aa28.18■■■□□ 2.1
CLDND1-226ENST00000513287 MEIS3P2A8K0S8 358 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 LYPLA2O95372 231 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 CTDNEP1O95476 244 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 AXLP30530 894 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 MRE11P49959 708 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 NUBP1P53384 320 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 MXD4Q14582 209 aaPredicted RBP28.17■■■□□ 2.1
CLDND1-226ENST00000513287 FERMT3Q86UX7 667 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 IFNLR1Q8IU57 520 aaPredicted RBP28.17■■■□□ 2.1
CLDND1-226ENST00000513287 URGCPQ8TCY9 931 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 OXER1Q8TDS5 423 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 SLC22A17Q8WUG5 538 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 USTQ9Y2C2 406 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 ZDBF2Q9HCK1 2354 aa28.17■■■□□ 2.1
CLDND1-226ENST00000513287 INPPL1O15357 1258 aa28.16■■■□□ 2.1
CLDND1-226ENST00000513287 NCLP19338 710 aaKnown RBP28.16■■■□□ 2.1
CLDND1-226ENST00000513287 UBALD2Q8IYN6 164 aa28.16■■■□□ 2.1
CLDND1-226ENST00000513287 TNFRSF25Q93038 417 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms