RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 PNMA5Q96PV4 448 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 C11orf84Q9BUA3 381 aaPredicted RBP19.68■□□□□ 0.74
DDR1-272ENST00000513243 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 NFKBIZQ9BYH8 718 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 FAM105AQ9NUU6 356 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 HCSTQ9UBK5 93 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 CLIC4Q9Y696 253 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 RALGAPA2Q2PPJ7 1873 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 FNDC1Q4ZHG4 1894 aaPredicted RBP19.67■□□□□ 0.74
DDR1-272ENST00000513243 GRM6O15303 877 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 TSPAN1O60635 241 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 ZNF623O75123 536 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 ERLIN2O94905 339 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 PCBP1Q15365 356 aaKnown RBP eCLIP19.67■□□□□ 0.74
DDR1-272ENST00000513243 ZRSR1Q15695 479 aaKnown RBP19.67■□□□□ 0.74
DDR1-272ENST00000513243 HYIQ5T013 277 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 LRRC55Q6ZSA7 311 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 BSNDQ8WZ55 320 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 POLD4Q9HCU8 107 aa19.67■□□□□ 0.74
DDR1-272ENST00000513243 TYW1Q9NV66 732 aaKnown RBP19.67■□□□□ 0.74
DDR1-272ENST00000513243 LRRIQ4A6NIV6 560 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 SKIP12755 728 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 RAB27AP51159 221 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 GRIN1Q05586 938 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 PTPAQ15257 358 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 AMHR2Q16671 573 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 PTPROQ16827 1216 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 LONRF3Q496Y0 759 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 UBXN11Q5T124 520 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 ABI1Q8IZP0 508 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 LPPQ93052 612 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 P2RX5Q93086 422 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 AK8Q96MA6 479 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 PLIN2Q99541 437 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 CWH43Q9H720 699 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 PLAGL2Q9UPG8 496 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 PCDHB2Q9Y5E7 798 aa19.66■□□□□ 0.74
DDR1-272ENST00000513243 MEIS3P2A8K0S8 358 aa19.65■□□□□ 0.74
DDR1-272ENST00000513243 NAALADL2Q58DX5 795 aa19.65■□□□□ 0.74
DDR1-272ENST00000513243 SPOUT1Q5T280 376 aaKnown RBP19.65■□□□□ 0.74
DDR1-272ENST00000513243 CABP7Q86V35 215 aa19.65■□□□□ 0.74
DDR1-272ENST00000513243 KLHL23Q8NBE8 558 aa19.65■□□□□ 0.74
DDR1-272ENST00000513243 HELQQ8TDG4 1101 aa19.65■□□□□ 0.74
DDR1-272ENST00000513243 CPB2Q96IY4 423 aa19.65■□□□□ 0.74
DDR1-272ENST00000513243 ALG13Q9NP73 1137 aaKnown RBP19.65■□□□□ 0.74
DDR1-272ENST00000513243 B4GALT5O43286 388 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 ITGB1P05556 798 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 HSP90AA1P07900 732 aaKnown RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 ARF4P18085 180 aaPredicted RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 AXLP30530 894 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 NCBP1Q09161 790 aaKnown RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 SKIV2LQ15477 1246 aaKnown RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 TMEM119Q4V9L6 283 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 CDCA2Q69YH5 1023 aaPredicted RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 RINT1Q6NUQ1 792 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 C1orf186Q6ZWK4 172 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 MRPL10Q7Z7H8 261 aaKnown RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 LRRC43Q8N309 656 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 KIFAP3Q92845 792 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 RUSC1Q9BVN2 902 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 NT5C3AQ9H0P0 336 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 LMAN2LQ9H0V9 348 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 ZSCAN16Q9H4T2 348 aaPredicted RBP19.64■□□□□ 0.73
DDR1-272ENST00000513243 AAASQ9NRG9 546 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 KIAA1671Q9BY89 1806 aa19.64■□□□□ 0.73
DDR1-272ENST00000513243 LONP1P36776 959 aaKnown RBP19.63■□□□□ 0.73
DDR1-272ENST00000513243 UBA7P41226 1012 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 NAMPTP43490 491 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 CEBPZQ03701 1054 aaKnown RBP19.63■□□□□ 0.73
DDR1-272ENST00000513243 CAMK1Q14012 370 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 NOTUMQ6P988 496 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 AGMOQ6ZNB7 445 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 ZBTB8OSQ8IWT0 167 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 KCTD17Q8N5Z5 321 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 COLGALT1Q8NBJ5 622 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 SPPL3Q8TCT6 385 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 CDK5RAP3Q96JB5 506 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 EIF2AQ9BY44 585 aaKnown RBP19.63■□□□□ 0.73
DDR1-272ENST00000513243 FZD8Q9H461 694 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 PCDHB12Q9Y5F1 795 aa19.63■□□□□ 0.73
DDR1-272ENST00000513243 REV3LO60673 3130 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 SLC26A4O43511 780 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 OFD1O75665 1012 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 LAG3P18627 525 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 DNAJB1P25685 340 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 MARCKSP29966 332 aaPredicted RBP19.62■□□□□ 0.73
DDR1-272ENST00000513243 PPP2R5AQ15172 486 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 GLB1LQ6UWU2 654 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 DAW1Q8N136 415 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 SYT2Q8N9I0 419 aaPredicted RBP19.62■□□□□ 0.73
DDR1-272ENST00000513243 SPRYD3Q8NCJ5 442 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 SMG8Q8ND04 991 aaKnown RBP19.62■□□□□ 0.73
DDR1-272ENST00000513243 DEPTORQ8TB45 409 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 PGBD4Q96DM1 585 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 CCDC51Q96ER9 411 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 IFT74Q96LB3 600 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 USP28Q96RU2 1077 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 KIFC3Q9BVG8 833 aa19.62■□□□□ 0.73
DDR1-272ENST00000513243 CSRNP2Q9H175 543 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms