RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
CDK7-209ENST00000512985 PIN4Q9Y237 131 aaKnown RBP14.11□□□□□ -0.15
CDK7-209ENST00000512985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.1□□□□□ -0.15
CDK7-209ENST00000512985 CCDC169A6NNP5 214 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 FAM13AO94988 1023 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 UPP2O95045 317 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 PLS3P13797 630 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 DNAJB2P25686 324 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 DEFB103AP81534 67 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 MCM6Q14566 821 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 ZNF697Q5TEC3 545 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 CDCA2Q69YH5 1023 aaPredicted RBP14.1□□□□□ -0.15
CDK7-209ENST00000512985 FAM109BQ6ICB4 259 aaPredicted RBP14.1□□□□□ -0.15
CDK7-209ENST00000512985 NOTUMQ6P988 496 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDK7-209ENST00000512985 USP49Q70CQ1 688 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 CEP57L1Q8IYX8 460 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 TIFAQ96CG3 184 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 RUSC1Q9BVN2 902 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 PBX4Q9BYU1 374 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 TNMDQ9H2S6 317 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 ELAC1Q9H777 363 aaKnown RBP14.1□□□□□ -0.15
CDK7-209ENST00000512985 KMT5AQ9NQR1 393 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 BLOC1S4Q9NUP1 217 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 USP25Q9UHP3 1055 aa14.1□□□□□ -0.15
CDK7-209ENST00000512985 K7ERI5 159 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 EOMESO95936 686 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 CMA1P23946 247 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 PEX3P56589 373 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 STRN3Q13033 797 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 AXDND1Q5T1B0 1012 aaPredicted RBP14.09□□□□□ -0.15
CDK7-209ENST00000512985 RESP18Q5W5W9 173 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 ABI1Q8IZP0 508 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 PDILTQ8N807 584 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 SPIRE2Q8WWL2 714 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 ADPGKQ9BRR6 497 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 OSBPL7Q9BZF2 842 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 TRIM6Q9C030 488 aaPredicted RBP14.09□□□□□ -0.15
CDK7-209ENST00000512985 TMX1Q9H3N1 280 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 PARVGQ9HBI0 331 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 TMEM161AQ9NX61 479 aa14.09□□□□□ -0.15
CDK7-209ENST00000512985 MICAL3Q7RTP6 2002 aa14.08□□□□□ -0.15
CDK7-209ENST00000512985 A0A0U1RQF3 1178 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 A0A1W2PQ27 194 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 A0A1W2PQ64 194 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 A0A1W2PQD8 194 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 CSDE1O75534 798 aaKnown RBP14.08□□□□□ -0.16
CDK7-209ENST00000512985 FGFR4P22455 802 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 NPTX2P47972 431 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 FXR1P51114 621 aaKnown RBP eCLIP14.08□□□□□ -0.16
CDK7-209ENST00000512985 MBTD1Q05BQ5 628 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 RAD51AP2Q09MP3 1159 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 DSC3Q14574 896 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 FAM187BQ17R55 369 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 TCTN1Q2MV58 587 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 PPP2R2DQ66LE6 453 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 FAM117BQ6P1L5 589 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 SHC4Q6S5L8 630 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 MYCT1Q8N699 235 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 DHX58Q96C10 678 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 PANK2Q9BZ23 570 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 ZHX3Q9H4I2 956 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 UBN1Q9NPG3 1134 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 SEL1LQ9UBV2 794 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 KCNH3Q9ULD8 1083 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 RWDD3Q9Y3V2 267 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 TET1Q8NFU7 2136 aa14.08□□□□□ -0.16
CDK7-209ENST00000512985 RANBP2P49792 3224 aaKnown RBP14.07□□□□□ -0.16
CDK7-209ENST00000512985 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 GRXCR1A8MXD5 290 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 C9IYK1 514 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 N4BP3O15049 544 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 POLR2DO15514 142 aaKnown RBP14.07□□□□□ -0.16
CDK7-209ENST00000512985 PRKCBP05771 671 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 GAP43P17677 238 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 RABGGTBP53611 331 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 FAM189BP81408 668 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 PRPF4BQ13523 1007 aaKnown RBP14.07□□□□□ -0.16
CDK7-209ENST00000512985 CCDC65Q8IXS2 484 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
CDK7-209ENST00000512985 DDX12PQ92771 950 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 SAMD11Q96NU1 681 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
CDK7-209ENST00000512985 REEP2Q9BRK0 252 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
CDK7-209ENST00000512985 FZD8Q9H461 694 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 MINDY3Q9H8M7 445 aa14.07□□□□□ -0.16
CDK7-209ENST00000512985 ACKR2O00590 384 aa14.06□□□□□ -0.16
CDK7-209ENST00000512985 MGEA5O60502 916 aa14.06□□□□□ -0.16
CDK7-209ENST00000512985 TSPAN1O60635 241 aa14.06□□□□□ -0.16
CDK7-209ENST00000512985 LIG1P18858 919 aa14.06□□□□□ -0.16
CDK7-209ENST00000512985 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
CDK7-209ENST00000512985 SYKP43405 635 aa14.06□□□□□ -0.16
CDK7-209ENST00000512985 ZNF131P52739 623 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms