RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF512Q96ME7 567 aaPredicted RBP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 MNTQ99583 582 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 FDXACB1Q9BRP7 624 aaPredicted RBP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 NOL10Q9BSC4 688 aaKnown RBP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 GPR87Q9BY21 358 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 PRDM12Q9H4Q4 367 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 SPTLC3Q9NUV7 552 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 FANCLQ9NW38 375 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 PARPBPQ9NWS1 579 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 RCAN3Q9UKA8 241 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 REXO2Q9Y3B8 237 aaKnown RBP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 MYPNQ86TC9 1320 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 PRSS38A1L453 326 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 GRXCR1A8MXD5 290 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 DAPK3O43293 454 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 HOXA3O43365 443 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 JUNP05412 331 aaKnown RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 HK1P19367 917 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 POU3F2P20265 443 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 TGM1P22735 817 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ADCY1Q08828 1119 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 CNGB1Q14028 1251 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 GAGE13Q4V321 117 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ZBTB41Q5SVQ8 909 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 KRT40Q6A162 431 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 TIGD7Q6NT04 549 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 KIF18BQ86Y91 864 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 LYSMD2Q8IV50 215 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ANKRD35Q8N283 1001 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 C7orf31Q8N865 590 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 MB21D1Q8N884 522 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 SMC1BQ8NDV3 1235 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 PPP1R14CQ8TAE6 165 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ZNF483Q8TF39 744 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ATXN2LQ8WWM7 1075 aaKnown RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 RPGRQ92834 1020 aaKnown RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 NINJ1Q92982 152 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 GPR101Q96P66 508 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 TARS2Q9BW92 718 aaKnown RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ANO3Q9BYT9 981 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 OSBPL6Q9BZF3 934 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ENKD1Q9H0I2 346 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 INTS7Q9NVH2 962 aaKnown RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 AURKAIP1Q9NWT8 199 aaPredicted RBP3.41□□□□□ -1.86
PDGFC-208ENST00000512711 C11orf21Q9P2W6 132 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 MSRAQ9UJ68 235 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 USP18Q9UMW8 372 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 ZKSCAN5Q9Y2L8 839 aa3.41□□□□□ -1.86
PDGFC-208ENST00000512711 LY86O95711 162 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 CASRP41180 1078 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 MAN2A2P49641 1150 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 LRRC32Q14392 662 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 TCEA2Q15560 299 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 CSRP2Q16527 193 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 DALRD3Q5D0E6 543 aaKnown RBP3.4□□□□□ -1.87
PDGFC-208ENST00000512711 PCSK4Q6UW60 755 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 C16orf86Q6ZW13 317 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 CXorf67Q86X51 503 aaPredicted RBP3.4□□□□□ -1.87
PDGFC-208ENST00000512711 VRK3Q8IV63 474 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 RPUSD2Q8IZ73 545 aaKnown RBP3.4□□□□□ -1.87
PDGFC-208ENST00000512711 MSL3Q8N5Y2 521 aaKnown RBP3.4□□□□□ -1.87
PDGFC-208ENST00000512711 AMER2Q8N7J2 671 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 MDGA1Q8NFP4 955 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 UBXN4Q92575 508 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 TRPS1Q9UHF7 1281 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 SYNPO2Q9UMS6 1093 aa3.4□□□□□ -1.87
PDGFC-208ENST00000512711 MRPL42Q9Y6G3 142 aaKnown RBP3.4□□□□□ -1.87
PDGFC-208ENST00000512711 A0A087X1B8 175 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 CYP27B1O15528 508 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 GAS7O60861 476 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 ALDH1A2O94788 518 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 PFKMP08237 780 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 MAKP20794 623 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 ZFP36P26651 326 aaKnown RBP3.39□□□□□ -1.87
PDGFC-208ENST00000512711 ADCYAP1R1P41586 468 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 NPEPPSP55786 919 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 SPIDRQ14159 915 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 RABL3Q5HYI8 236 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 MRGPREQ86SM8 312 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 JAZF1Q86VZ6 243 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 HOMER1Q86YM7 354 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 ULK2Q8IYT8 1036 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 EFHBQ8N7U6 833 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 GPR150Q8NGU9 434 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 UIMC1Q96RL1 719 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 AGAP2Q99490 1192 aa3.39□□□□□ -1.87
PDGFC-208ENST00000512711 CPEB1Q9BZB8 566 aaKnown RBP3.39□□□□□ -1.87
PDGFC-208ENST00000512711 ZNF768Q9H5H4 540 aaKnown RBP3.39□□□□□ -1.87
PDGFC-208ENST00000512711 C14orf93Q9H972 538 aaKnown RBP3.39□□□□□ -1.87
PDGFC-208ENST00000512711 A0A087X0B3 334 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 AHRRA9YTQ3 701 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 MFAP3LO75121 409 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 FSBPO95073 299 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 CLEC2LP0C7M8 214 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 SCNN1BP51168 640 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 KPNA1P52294 538 aaPredicted RBP3.38□□□□□ -1.87
PDGFC-208ENST00000512711 INHBCP55103 352 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms