RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 PLXNA3P51805 1871 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 FGF18O76093 207 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 LYPLA2O95372 231 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 SFPQP23246 707 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDK7-208ENST00000512687 PHKA2P46019 1235 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 CDC42EP1Q00587 391 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 LAMTOR4Q0VGL1 99 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 NBR1Q14596 966 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 LONRF3Q496Y0 759 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
CDK7-208ENST00000512687 FERMT3Q86UX7 667 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 FBXO18Q8NFZ0 1043 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 PSPC1Q8WXF1 523 aaKnown RBP13.42□□□□□ -0.26
CDK7-208ENST00000512687 LPPQ93052 612 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 MTRQ99707 1265 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 IGFLR1Q9H665 355 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 PPME1Q9Y570 386 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 PCDHB12Q9Y5F1 795 aa13.42□□□□□ -0.26
CDK7-208ENST00000512687 HOXA2O43364 376 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 GLP2RO95838 553 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 LAG3P18627 525 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 ERVFC1P60507 584 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 HMGN5P82970 282 aaKnown RBP13.41□□□□□ -0.26
CDK7-208ENST00000512687 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDK7-208ENST00000512687 ZNF174Q15697 407 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 CLUL1Q15846 466 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 TWF2Q6IBS0 349 aaKnown RBP13.41□□□□□ -0.26
CDK7-208ENST00000512687 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 CATSPER4Q7RTX7 472 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 THNSL1Q8IYQ7 743 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 ASAP3Q8TDY4 903 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 PIGOQ8TEQ8 1089 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
CDK7-208ENST00000512687 CHST12Q9NRB3 414 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 AGPAT5Q9NUQ2 364 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 C2orf16Q68DN1 1984 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
CDK7-208ENST00000512687 FSCN2O14926 492 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 GAS2O43903 313 aaKnown RBP13.4□□□□□ -0.26
CDK7-208ENST00000512687 MED24O75448 989 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 EOMESO95936 686 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
CDK7-208ENST00000512687 NRIP1P48552 1158 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 RARRES1P49788 294 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 RBM10P98175 930 aaKnown RBP13.4□□□□□ -0.26
CDK7-208ENST00000512687 UBE3AQ05086 875 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 ADAM15Q13444 863 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 RABEP1Q15276 862 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 TTC38Q5R3I4 469 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 KCNT2Q6UVM3 1135 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 SRGAP1Q7Z6B7 1085 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 RBM23Q86U06 439 aaKnown RBP13.4□□□□□ -0.26
CDK7-208ENST00000512687 NOSTRINQ8IVI9 506 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 FAM184AQ8NB25 1140 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 RNF149Q8NC42 400 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
CDK7-208ENST00000512687 TLR9Q9NR96 1032 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 ANKEF1Q9NU02 776 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 FAM105AQ9NUU6 356 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.26
CDK7-208ENST00000512687 B4GALT3O60512 393 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 OR52Z1P0C646 297 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 TECP42680 631 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 TOB1P50616 345 aaPredicted RBP13.39□□□□□ -0.27
CDK7-208ENST00000512687 PLCB3Q01970 1234 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 CAPSQ13938 189 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 CATSPER3Q86XQ3 398 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 EFHBQ8N7U6 833 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 C4orf32Q8N8J7 132 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 VN1R2Q8NFZ6 395 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
CDK7-208ENST00000512687 MSLNLQ96KJ4 702 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 ZNF558Q96NG5 402 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 CLEC1BQ9P126 229 aa13.39□□□□□ -0.27
CDK7-208ENST00000512687 PDCD11Q14690 1871 aaKnown RBP13.39□□□□□ -0.27
CDK7-208ENST00000512687 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
CDK7-208ENST00000512687 NT5C1B-RDH14C9J2C7 533 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 PER2O15055 1255 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 MBTPS2O43462 519 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 NCK2O43639 380 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 TSPAN1O60635 241 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
CDK7-208ENST00000512687 ZNF623O75123 536 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 DGAT1O75907 488 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 GLRA2P23416 452 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms