RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GALTP07902 379 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 MTERF2Q49AM1 385 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 OTUD6AQ7L8S5 288 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 SRGAP1Q7Z6B7 1085 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
VEGFA-216ENST00000512683 ZBTB33Q86T24 672 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 VPS52Q8N1B4 723 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 SLC7A3Q8WY07 619 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 IGSF21Q96ID5 467 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-216ENST00000512683 FAM105AQ9NUU6 356 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 DAXXQ9UER7 740 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-216ENST00000512683 DDX25Q9UHL0 483 aaKnown RBP14.09□□□□□ -0.15
VEGFA-216ENST00000512683 SSX2IPQ9Y2D8 614 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 TECTAO75443 2155 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 RFC5P40937 340 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 DRP2Q13474 957 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 MTMR3Q13615 1198 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 IER5LQ5T953 404 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 CYP26C1Q6V0L0 522 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 ANO5Q75V66 913 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 CATSPER4Q7RTX7 472 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 RHPN2Q8IUC4 686 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 C4orf19Q8IY42 314 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 PRSS33Q8NF86 280 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 URGCPQ8TCY9 931 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 TCP11Q8WWU5 503 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 TMEM175Q9BSA9 504 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 ZBP1Q9H171 429 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 DPP7Q9UHL4 492 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
VEGFA-216ENST00000512683 CNTNAP2Q9UHC6 1331 aa14.08□□□□□ -0.16
VEGFA-216ENST00000512683 ZDBF2Q9HCK1 2354 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 ST18O60284 1047 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 TDP2O95551 362 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 FGFR4P22455 802 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 PBX3P40426 434 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 RNASELQ05823 741 aaKnown RBP14.07□□□□□ -0.16
VEGFA-216ENST00000512683 POU5F1BQ06416 359 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 NCBP1Q09161 790 aaKnown RBP14.07□□□□□ -0.16
VEGFA-216ENST00000512683 TCF15Q12870 199 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 STK3Q13188 491 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 EPHA7Q15375 998 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 KIAA1841Q6NSI8 718 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 KREMEN2Q8NCW0 462 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 SLC22A17Q8WUG5 538 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 PSPC1Q8WXF1 523 aaKnown RBP14.07□□□□□ -0.16
VEGFA-216ENST00000512683 EMILIN2Q9BXX0 1053 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 RHOBTB2Q9BYZ6 727 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 DHX33Q9H6R0 707 aaKnown RBP14.07□□□□□ -0.16
VEGFA-216ENST00000512683 NRDE2Q9H7Z3 1164 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 IFT122Q9HBG6 1241 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 KCNMB3Q9NPA1 279 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 PDRG1Q9NUG6 133 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 AGPAT5Q9NUQ2 364 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
VEGFA-216ENST00000512683 ATG2AQ2TAZ0 1938 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 ZNF318Q5VUA4 2279 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 CCDC194A0A1B0GVG4 234 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
VEGFA-216ENST00000512683 AXLP30530 894 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 NPY5RQ15761 445 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 ELMSAN1Q6PJG2 1045 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 CABP7Q86V35 215 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 ACSF2Q96CM8 615 aaPredicted RBP14.06□□□□□ -0.16
VEGFA-216ENST00000512683 CCDC51Q96ER9 411 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 ZNF668Q96K58 619 aaPredicted RBP14.06□□□□□ -0.16
VEGFA-216ENST00000512683 CEP170P1Q96L14 293 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 AIFM3Q96NN9 605 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 PCDHB2Q9Y5E7 798 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 COL4A3BPQ9Y5P4 624 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 CACNA1HO95180 2353 aa14.06□□□□□ -0.16
VEGFA-216ENST00000512683 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 NT5C1B-RDH14C9J2C7 533 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 PROB1E7EW31 1015 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 CLCN5P51795 746 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 LETM2Q2VYF4 491 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 C15orf39Q6ZRI6 1047 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 OTOP3Q7RTS5 596 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 GPR65Q8IYL9 337 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 PRPF31Q8WWY3 499 aaKnown RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 WASF1Q92558 559 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 NLRP4Q96MN2 994 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 FAM193BQ96PV7 902 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 PHF20Q9BVI0 1012 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 SLKQ9H2G2 1235 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-216ENST00000512683 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 TPCN1Q9ULQ1 816 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 FAN1Q9Y2M0 1017 aa14.05□□□□□ -0.16
VEGFA-216ENST00000512683 KIAA1671Q9BY89 1806 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 C2CD4DB7Z1M9 353 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms