RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-267	ENST00000512336	CNTNAP5	Q8WYK1	1306 aa		13.8	□□□□□ -0.2
DDR1-267	ENST00000512336	CHD6	Q8TD26	2715 aa		13.8	□□□□□ -0.2
DDR1-267	ENST00000512336	SPTBN2	O15020	2390 aa		13.8	□□□□□ -0.2
DDR1-267	ENST00000512336	CCDC195	A0A1B0GUA6	201 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	LILRB3	O75022	631 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	MYB	P10242	640 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	GLUL	P15104	373 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	CHML	P26374	656 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	MCM5	P33992	734 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	LIFR	P42702	1097 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	CLK2	P49760	499 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	TWF2	Q6IBS0	349 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	PPP1R18	Q6NYC8	613 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	MICU3	Q86XE3	530 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	ZNF280B	Q86YH2	543 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	RSPH1	Q8WYR4	309 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	STAM	Q92783	540 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	TMEM87B	Q96K49	555 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	FAM167A	Q96KS9	214 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	LRRC2	Q9BYS8	371 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	FOXQ1	Q9C009	403 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	TCEAL9	Q9UHQ7	104 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	PCDHA10	Q9Y5I2	948 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	CLUH	O75153	1309 aa		13.79	□□□□□ -0.2
DDR1-267	ENST00000512336	SMCO2	A6NFE2	343 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	C2CD2L	O14523	706 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	ZNF862	O60290	1169 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	KIN	O60870	393 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	LRRN2	O75325	713 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	OFD1	O75665	1012 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	OAT	P04181	439 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	DRP2	Q13474	957 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	JAKMIP3	Q5VZ66	844 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	TEX2	Q8IWB9	1127 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	MAP4K1	Q92918	833 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	NXPE3	Q969Y0	559 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	TRAIP	Q9BWF2	469 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	CHST12	Q9NRB3	414 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	MRPL17	Q9NRX2	175 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	TBC1D22B	Q9NU19	505 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	PIN4	Q9Y237	131 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	SAMM50	Q9Y512	469 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	RBM8A	Q9Y5S9	174 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	CHD8	Q9HCK8	2581 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	FANCM	Q8IYD8	2048 aa		13.78	□□□□□ -0.2
DDR1-267	ENST00000512336	INPPL1	O15357	1258 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	SGSM2	O43147	1006 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	RFPL2	O75678	378 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	DDHD2	O94830	711 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	ATXN1	P54253	815 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	AK2	P54819	239 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	PRKCE	Q02156	737 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	TTC22	Q5TAA0	569 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	DCLRE1A	Q6PJP8	1040 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	PJA1	Q8NG27	643 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	CRYGN	Q8WXF5	182 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	NRBP2	Q9NSY0	501 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	FAM105A	Q9NUU6	356 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	NCDN	Q9UBB6	729 aa		13.77	□□□□□ -0.21
DDR1-267	ENST00000512336	MYH9	P35579	1960 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336		A0A087WZ62	844 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	TEX28	O15482	410 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	UROD	P06132	367 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	CYP3A4	P08684	503 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	SKI	P12755	728 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	AFF1	P51825	1210 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	SET	Q01105	290 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	UGCG	Q16739	394 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	VARS2	Q5ST30	1063 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	CYP26C1	Q6V0L0	522 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	GET4	Q7L5D6	327 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	SMG7	Q92540	1137 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	ZNF707	Q96C28	371 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	RPS6KC1	Q96S38	1066 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	RHOBTB2	Q9BYZ6	727 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	BARHL2	Q9NY43	387 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	STK39	Q9UEW8	545 aa		13.76	□□□□□ -0.21
DDR1-267	ENST00000512336	USP24	Q9UPU5	2620 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	WDR64	B1ANS9	1081 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	ADAMTS3	O15072	1205 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	ZNF623	O75123	536 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	GLUD1	P00367	558 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	SOD2	P04179	222 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	ADH1A	P07327	375 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	SFPQ	P23246	707 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	FUT2	Q10981	343 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	HTR4	Q13639	388 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	AGMO	Q6ZNB7	445 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	TAS1R1	Q7RTX1	841 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	URGCP	Q8TCY9	931 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	HERC2P3	Q9BVR0	1158 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	GLT8D2	Q9H1C3	349 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	SLC2A4RG	Q9NR83	387 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	FAN1	Q9Y2M0	1017 aa		13.75	□□□□□ -0.21
DDR1-267	ENST00000512336	NUMBL	Q9Y6R0	609 aa		13.75	□□□□□ -0.21

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