RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 RPL9P32969 192 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 NDUFV1P49821 464 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 FXR2P51116 673 aaKnown RBP eCLIP10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 PAK1Q13153 545 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 GBP6Q6ZN66 633 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 TSHZ1Q6ZSZ6 1077 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 RTL10Q7L3V2 364 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 LEO1Q8WVC0 666 aaPredicted RBP10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 CPSF3Q9UKF6 684 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 MMP3P08254 477 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 CA4P22748 312 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 KRT9P35527 623 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 SNAP25P60880 206 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 AMIGO3Q86WK7 504 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 COG5Q9UP83 839 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 UBIAD1Q9Y5Z9 338 aa10.49□□□□□ -0.73
POLR2J3-215ENST00000511313 IGF2BP3O00425 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 THP07101 528 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 KRT5P13647 590 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 OR1G1P47890 313 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PTK2Q05397 1052 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PPM1LQ5SGD2 360 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ACBD5Q5T8D3 534 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ATF7IP2Q5U623 682 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 CYP26C1Q6V0L0 522 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PRRX2Q99811 253 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 POLIQ9UNA4 740 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PCDHA2Q9Y5H9 948 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ZNF536O15090 1300 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 CNTNAP5Q8WYK1 1306 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 TNS1Q9HBL0 1735 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PLS3P13797 630 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 XXYLT1Q8NBI6 393 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 KIAA1524Q8TCG1 905 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 RABGGTAQ92696 567 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 KIAA1257Q9ULG3 409 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 UBR2Q8IWV8 1755 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 INSRRP14616 1297 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 KLRC2P26717 231 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 SCRN1Q12765 414 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 MYBPC2Q14324 1141 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ZNF792Q3KQV3 632 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 SLC27A1Q6PCB7 646 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 SLC24A5Q71RS6 500 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 SUGP1Q8IWZ8 645 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 CCSER1Q9C0I3 900 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 RSAD1Q9HA92 442 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PGK1P00558 417 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 GARTP22102 1010 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 LHX1P48742 406 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 TAF6P49848 677 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 PEX3P56589 373 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 GSDMDP57764 484 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 TFAMQ00059 246 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 CST9Q5W186 159 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ZFPM1Q8IX07 1006 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 MAIP1Q8WWC4 291 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 TMEM175Q9BSA9 504 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 ZMYND8Q9ULU4 1186 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 IRS2Q9Y4H2 1338 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 TJP1Q07157 1748 aa10.48□□□□□ -0.73
POLR2J3-215ENST00000511313 SYT1P21579 422 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 ST8SIA6P61647 398 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 POU5F1BQ06416 359 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 SEC23AQ15436 765 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 ANKS3Q6ZW76 656 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 KIAA1328Q86T90 577 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 BHMT2Q9H2M3 363 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 PLEKHA5Q9HAU0 1116 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 RGPD2P0DJD1 1756 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 PHF20L1A8MW92 1017 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 DAPK3O43293 454 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 CACNB2Q08289 660 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 TMEM132DQ14C87 1099 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 DCAF17Q5H9S7 520 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 UNC13DQ70J99 1090 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 INPP4AQ96PE3 977 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 FAM124BQ9H5Z6 455 aaPredicted RBP10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 MEIS1O00470 390 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 SORBS3O60504 671 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 ARPP19P56211 112 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 ZPBP2Q6X784 338 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 GPD1LQ8N335 351 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 SPIRE2Q8WWL2 714 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 HAUS1Q96CS2 278 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 KIF12Q96FN5 646 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 RAD9AQ99638 391 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 TLE6Q9H808 572 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
POLR2J3-215ENST00000511313 SCN4AP35499 1836 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms