RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 POMCP01189 267 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TNNC2P02585 160 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 INSRRP14616 1297 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CIITAP33076 1130 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 KRT2P35908 639 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RRP1P56182 461 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PLCB3Q01970 1234 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LMAN2Q12907 356 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MYO1EQ12965 1108 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 GRIK3Q13003 919 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 STIM1Q13586 685 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 EPHA7Q15375 998 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SMAD2Q15796 467 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PLEKHG4Q58EX7 1191 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MYSM1Q5VVJ2 828 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TPGS2Q68CL5 300 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LAIR1Q6GTX8 287 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 KCNT2Q6UVM3 1135 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PI16Q6UXB8 463 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 C15orf39Q6ZRI6 1047 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RAB11FIP4Q86YS3 637 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 FANCBQ8NB91 859 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RDH13Q8NBN7 331 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CMASQ8NFW8 434 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LEO1Q8WVC0 666 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 DNAJB3Q8WWF6 145 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 DNASE1L2Q92874 299 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 GTF3C6Q969F1 213 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RNF34Q969K3 372 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TRIM43Q96BQ3 446 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CCDC114Q96M63 670 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CDK5RAP1Q96SZ6 601 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RNF26Q9BY78 433 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 C17orf75Q9HAS0 396 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RIC8AQ9NPQ8 531 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ASAH2Q9NR71 780 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SH2B1Q9NRF2 756 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TRMT13Q9NUP7 481 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SETD4Q9NVD3 440 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 DONSONQ9NYP3 566 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 BCCIPQ9P287 314 aaKnown RBP eCLIP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LRRIQ4A6NIV6 560 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SOBPA7XYQ1 873 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SPATA31C2B4DYI2 1134 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PRKAB2O43741 272 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 STX6O43752 255 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 STX10O60499 249 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 NDUFS2O75306 463 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 FGF18O76093 207 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MOCS3O95396 460 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 NPTXRO95502 500 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 FGFR1OPO95684 399 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 OATP04181 439 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PCSK1P29120 753 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 AVPR2P30518 371 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 UBA7P41226 1012 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RBM25P49756 843 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 NLRP11P59045 1033 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ACTR2P61160 394 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZXDAP98168 799 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 HSF5Q4G112 596 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PRR16Q569H4 304 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 HERC4Q5GLZ8 1057 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 FAM26DQ5JW98 314 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF618Q5T7W0 954 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TTC22Q5TAA0 569 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 EFCAB12Q6NXP0 572 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 DCLRE1AQ6PJP8 1040 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SLC36A4Q6YBV0 504 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 C4orf50Q6ZRC1 276 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PRR23BQ6ZRT6 265 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 STOX1Q6ZVD7 989 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RNF135Q8IUD6 432 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CELF5Q8N6W0 485 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 GOLGA5Q8TBA6 731 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 GDPD5Q8WTR4 605 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LOXL4Q96JB6 756 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 GNEQ9Y223 722 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SRPRBQ9Y5M8 271 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SOWAHBA6NEL2 793 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 OR6C75A6NL08 312 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CCDC169A6NNP5 214 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PIK3CDO00329 1044 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MBTPS2O43462 519 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF862O60290 1169 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CNMDO75829 334 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SMC2O95347 1197 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 OR52Z1P0C646 297 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 LIG1P18858 919 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RPL9P32969 192 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 AVPR1AP37288 418 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TNNT3P45378 269 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PPM1FP49593 454 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 OXCT1P55809 520 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 USP4Q13107 963 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PGM5Q15124 567 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PDGFRLQ15198 375 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 INF2Q27J81 1249 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SGO2Q562F6 1265 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms