RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
DDX41-212ENST00000511040 LIG1P18858 919 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 HOXA11P31270 313 aaPredicted RBP15.48■□□□□ 0.07
DDX41-212ENST00000511040 LONP1P36776 959 aaKnown RBP15.48■□□□□ 0.07
DDX41-212ENST00000511040 KARSQ15046 597 aaKnown RBP15.48■□□□□ 0.07
DDX41-212ENST00000511040 HYIQ5T013 277 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 FAM43BQ6ZT52 329 aaPredicted RBP15.48■□□□□ 0.07
DDX41-212ENST00000511040 USP49Q70CQ1 688 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 RASSF8Q8NHQ8 419 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 LPPQ93052 612 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 AK8Q96MA6 479 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 CLIC6Q96NY7 704 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 KIFC3Q9BVG8 833 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 ELAC1Q9H777 363 aaKnown RBP15.48■□□□□ 0.07
DDX41-212ENST00000511040 MTCH2Q9Y6C9 303 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 NLRC5Q86WI3 1866 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 B4GALT5O43286 388 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 GTPBP6O43824 516 aaPredicted RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 CSPG5O95196 566 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 PLA2G4BP0C869 781 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 BMPR1AP36894 532 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 GPM6BQ13491 265 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 DHX8Q14562 1220 aaKnown RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 CLLU1OSQ5K130 101 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 SPOUT1Q5T280 376 aaKnown RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 RINT1Q6NUQ1 792 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 ZNF598Q86UK7 904 aaKnown RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 DEPTORQ8TB45 409 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 HELQQ8TDG4 1101 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 LRRC15Q8TF66 581 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 EPSTI1Q96J88 318 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 SAMD11Q96NU1 681 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 NT5C3AQ9H0P0 336 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 FAM105AQ9NUU6 356 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 DAXXQ9UER7 740 aaPredicted RBP15.47■□□□□ 0.07
DDX41-212ENST00000511040 USP20Q9Y2K6 914 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 PCDHB2Q9Y5E7 798 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 COL6A3P12111 3177 aa15.47■□□□□ 0.07
DDX41-212ENST00000511040 FNDC1Q4ZHG4 1894 aaPredicted RBP15.46■□□□□ 0.07
DDX41-212ENST00000511040 NPHP3-ACAD11A0A0J9YXS1 232 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 MEIS3P2A8K0S8 358 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 HIP1RO75146 1068 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 F13A1P00488 732 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 PLCG1P19174 1290 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 POU5F1BQ06416 359 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 STK38Q15208 465 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 AMHR2Q16671 573 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 UBXN11Q5T124 520 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 C1orf186Q6ZWK4 172 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 CDR2LQ86X02 465 aaPredicted RBP15.46■□□□□ 0.07
DDX41-212ENST00000511040 ZBTB8OSQ8IWT0 167 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 ABI1Q8IZP0 508 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 KIFAP3Q92845 792 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 CLP1Q92989 425 aaKnown RBP15.46■□□□□ 0.07
DDX41-212ENST00000511040 IFT74Q96LB3 600 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 ZNF396Q96N95 335 aaPredicted RBP15.46■□□□□ 0.07
DDX41-212ENST00000511040 CASD1Q96PB1 797 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 TMEM117Q9H0C3 514 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 TYW1Q9NV66 732 aaKnown RBP15.46■□□□□ 0.07
DDX41-212ENST00000511040 SRPRBQ9Y5M8 271 aaKnown RBP15.46■□□□□ 0.07
DDX41-212ENST00000511040 MYH15Q9Y2K3 1946 aa15.46■□□□□ 0.07
DDX41-212ENST00000511040 KIAA1671Q9BY89 1806 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 TTLL13PA6NNM8 815 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 SFI1A8K8P3 1242 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 EOMESO95936 686 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 ARF4P18085 180 aaPredicted RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 NAMPTP43490 491 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 NASPP49321 788 aaPredicted RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 SLC12A3P55017 1021 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 PEX3P56589 373 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 CACNB1Q02641 598 aaPredicted RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 MAPK7Q13164 816 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 SLC39A14Q15043 492 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 CDCA2Q69YH5 1023 aaPredicted RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 LRRC55Q6ZSA7 311 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 DAW1Q8N136 415 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 SYT2Q8N9I0 419 aaPredicted RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 EIF2AQ9BY44 585 aaKnown RBP15.45■□□□□ 0.06
DDX41-212ENST00000511040 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 PRDM6Q9NQX0 595 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 BLOC1S4Q9NUP1 217 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 INPP5FQ9Y2H2 1132 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 RALGAPA2Q2PPJ7 1873 aa15.45■□□□□ 0.06
DDX41-212ENST00000511040 CCDC169A6NNP5 214 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 H3BNC9 293 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 GRM6O15303 877 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 HOXA2O43364 376 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 SLC26A4O43511 780 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 SKIP12755 728 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 RAB27AP51159 221 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 NCBP1Q09161 790 aaKnown RBP15.44■□□□□ 0.06
DDX41-212ENST00000511040 MCM6Q14566 821 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 PPP2R5AQ15172 486 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 TMEM132AQ24JP5 1023 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 NOTUMQ6P988 496 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms