RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 POLR2DO15514 142 aaKnown RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 THP07101 528 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 PURAQ00577 322 aaKnown RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 PPM1LQ5SGD2 360 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 NIPA1Q7RTP0 329 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 OR6B3Q8NGW1 331 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
LIN54-210ENST00000510877 LUC7LQ9NQ29 371 aaKnown RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 BRD2P25440 801 aaKnown RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 ATL3Q6DD88 541 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 RASSF4Q9H2L5 321 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 TMEM265A0A087WTH1 108 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 NCK2O43639 380 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 SYT1P21579 422 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 KARSQ15046 597 aaKnown RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 ZNF410Q86VK4 478 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 ZNF512Q96ME7 567 aaPredicted RBP13.57□□□□□ -0.24
LIN54-210ENST00000510877 POLD4Q9HCU8 107 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 RREB1Q92766 1687 aa13.57□□□□□ -0.24
LIN54-210ENST00000510877 FSD2A1L4K1 749 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 ST7Q9NRC1 585 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 CCDC172P0C7W6 258 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 PLPPR4Q7Z2D5 763 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 PADI3Q9ULW8 664 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 MNAT1P51948 309 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 ALCAMQ13740 583 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 MGAT5BQ3V5L5 792 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 METTL16Q86W50 562 aaKnown RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 PPFIBP1Q86W92 1011 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 UNC45AQ9H3U1 944 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 KCNH3Q9ULD8 1083 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 CA3P07451 260 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 FGFR4P22455 802 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 PPP1R2P41236 205 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 RABGGTBP53611 331 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 MAFAQ8NHW3 353 aaPredicted RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 TBC1D32Q96NH3 1257 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
LIN54-210ENST00000510877 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
LIN54-210ENST00000510877 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 ZNF233A6NK53 670 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 DCAF4L1Q3SXM0 396 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 KIAA1755Q5JYT7 1200 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 TSHZ1Q6ZSZ6 1077 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 IL31RAQ8NI17 732 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
LIN54-210ENST00000510877 NOMO2Q5JPE7 1267 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 BTBD8Q5XKL5 378 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 MICALCLQ6ZW33 695 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 EHD2Q9NZN4 543 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
LIN54-210ENST00000510877 BCAR1P56945 870 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 ZNF200P98182 395 aaPredicted RBP13.55□□□□□ -0.24
LIN54-210ENST00000510877 DCP1BQ8IZD4 617 aaKnown RBP13.55□□□□□ -0.24
LIN54-210ENST00000510877 INTS4Q96HW7 963 aaKnown RBP13.55□□□□□ -0.24
LIN54-210ENST00000510877 GPR20Q99678 358 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 TRPC7Q9HCX4 862 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
LIN54-210ENST00000510877 THEGQ9P2T0 379 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
LIN54-210ENST00000510877 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
LIN54-210ENST00000510877 NR1H3Q13133 447 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 SHHQ15465 462 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 POP1Q99575 1024 aaKnown RBP13.54□□□□□ -0.24
LIN54-210ENST00000510877 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 PCIF1Q9H4Z3 704 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 A6NJR5 290 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 B4GALT4O60513 344 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 F13A1P00488 732 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 PPP2R5DQ14738 602 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 CAMK4Q16566 473 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 HELQQ8TDG4 1101 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 PAIP2Q9BPZ3 127 aaKnown RBP13.54□□□□□ -0.24
LIN54-210ENST00000510877 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 MTHFD1LQ6UB35 978 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms