RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 CHST12Q9NRB3 414 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 AGPAT5Q9NUQ2 364 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 CLDND1Q9NY35 253 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 DACT1Q9NYF0 836 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 PCDHB12Q9Y5F1 795 aa11.48□□□□□ -0.57
PFDN1-203ENST00000510217 MYO7AQ13402 2215 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 LINC01565O15544 149 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 TBX10O75333 385 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 FGF18O76093 207 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 OR52Z1P0C646 297 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 SPATA31C1P0DKV0 1188 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 IL9P15248 144 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 PBX3P40426 434 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 PHKA2P46019 1235 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 RARRES1P49788 294 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 DLX2Q07687 328 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-203ENST00000510217 ORC2Q13416 577 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-203ENST00000510217 TTC38Q5R3I4 469 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 TWF2Q6IBS0 349 aaKnown RBP11.47□□□□□ -0.57
PFDN1-203ENST00000510217 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-203ENST00000510217 CATSPER4Q7RTX7 472 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 ABI1Q8IZP0 508 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 FAM184AQ8NB25 1140 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 PRPF31Q8WWY3 499 aaKnown RBP11.47□□□□□ -0.57
PFDN1-203ENST00000510217 INO80BQ9C086 356 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-203ENST00000510217 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
PFDN1-203ENST00000510217 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 MEIS3P2A8K0S8 358 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 FSCN2O14926 492 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 MED24O75448 989 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 GLP2RO95838 553 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 EOMESO95936 686 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 NUBP1P53384 320 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 UBE3AQ05086 875 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 ZNF174Q15697 407 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 CSPP1Q1MSJ5 1256 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-203ENST00000510217 EP400NLQ6ZTU2 488 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 SRGAP1Q7Z6B7 1085 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 RNF149Q8NC42 400 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 PIGOQ8TEQ8 1089 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 TCP11Q8WWU5 503 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 LPPQ93052 612 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 TLR9Q9NR96 1032 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 FAM105AQ9NUU6 356 aa11.46□□□□□ -0.57
PFDN1-203ENST00000510217 NCK2O43639 380 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 TRAK2O60296 914 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
PFDN1-203ENST00000510217 DGAT1O75907 488 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 U2AF2P26368 475 aaKnown RBP eCLIP11.45□□□□□ -0.582e-7■■■□□ 17.7
PFDN1-203ENST00000510217 HOXA11P31270 313 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-203ENST00000510217 PPM1AP35813 382 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 TECP42680 631 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 NRIP1P48552 1158 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 MCM2P49736 904 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 RAB27AP51159 221 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 ERVFC1P60507 584 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 PLCB3Q01970 1234 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 ADAM15Q13444 863 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 GNL2Q13823 731 aaKnown RBP11.45□□□□□ -0.58
PFDN1-203ENST00000510217 CAPSQ13938 189 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 PUS10Q3MIT2 529 aaKnown RBP11.45□□□□□ -0.58
PFDN1-203ENST00000510217 LONRF3Q496Y0 759 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 UBXN11Q5T124 520 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 KCNT2Q6UVM3 1135 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 CATSPER3Q86XQ3 398 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 FAM178BQ8IXR5 827 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 MRPS27Q92552 414 aaKnown RBP11.45□□□□□ -0.58
PFDN1-203ENST00000510217 TMX3Q96JJ7 454 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 ZNF558Q96NG5 402 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 MRPL9Q9BYD2 267 aaKnown RBP11.45□□□□□ -0.58
PFDN1-203ENST00000510217 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 TUFT1Q9NNX1 390 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 CD320Q9NPF0 282 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 LZTS1Q9Y250 596 aa11.45□□□□□ -0.58
PFDN1-203ENST00000510217 A0A087WWV3 80 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 FSD2A1L4K1 749 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 GOLGA6L22H0YM25 854 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 ASAP2O43150 1006 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 TSPAN1O60635 241 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 ZNF623O75123 536 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 SKIP12755 728 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 GLRA2P23416 452 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 ARL2P36404 184 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
PFDN1-203ENST00000510217 PTENP60484 403 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 NUCB2P80303 420 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 MBTD1Q05BQ5 628 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 MXD4Q14582 209 aaPredicted RBP11.44□□□□□ -0.58
PFDN1-203ENST00000510217 CLUL1Q15846 466 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 PLPP4Q5VZY2 271 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms