RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199		A0A087WZ62	844 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	DENND3	A2RUS2	1198 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	PPP1R3G	B7ZBB8	358 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199		M0QZ92	97 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	GPR32	O75388	356 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	MYB	P10242	640 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	PHKA2	P46019	1235 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	EFNA5	P52803	228 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	PTEN	P60484	403 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	MRPS6	P82932	125 aa	Known RBP	13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	BMT2	Q1RMZ1	405 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	TRIM71	Q2Q1W2	868 aa	Known RBP	13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	DPCR1	Q3MIW9	517 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	UBE2Q1	Q7Z7E8	422 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	ADSSL1	Q8N142	457 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	GLIS3	Q8NEA6	775 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	SCFD1	Q8WVM8	642 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	NLRP7	Q8WX94	980 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	DHX38	Q92620	1227 aa	Known RBP	13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	WNT8B	Q93098	351 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	KIFC3	Q9BVG8	833 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	ADAMTS10	Q9H324	1103 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	IFT122	Q9HBG6	1241 aa		13.17	□□□□□ -0.3
RACK1-223	ENST00000510199	DCDC2C	A8MYV0	355 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199		K7ERI5	159 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	PRPF6	O94906	941 aa	Known RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CD44	P16070	742 aa	Known RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CRYBB1	P53674	252 aa	Predicted RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	RBL2	Q08999	1139 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	TMEM62	Q0P6H9	643 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	KIZ	Q2M2Z5	673 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	L1TD1	Q5T7N2	865 aa	Known RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	SRGAP1	Q7Z6B7	1085 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CCDC155	Q8N6L0	562 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CAGE1	Q8TC20	777 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	ABHD8	Q96I13	439 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	ZNF668	Q96K58	619 aa	Predicted RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	SCLT1	Q96NL6	688 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CELF4	Q9BZC1	486 aa	Known RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	INO80B	Q9C086	356 aa	Predicted RBP	13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CCDC113	Q9H0I3	377 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	TMEM206	Q9H813	350 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	TBX20	Q9UMR3	447 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	MAPK8IP1	Q9UQF2	711 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	TRPV2	Q9Y5S1	764 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	CDY2A	Q9Y6F7	541 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	ANK1	P16157	1881 aa		13.16	□□□□□ -0.3
RACK1-223	ENST00000510199	TET1	Q8NFU7	2136 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	PSMA7	O14818	248 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	PQBP1	O60828	265 aa	Known RBP	13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	CAVIN2	O95810	425 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	THPO	P40225	353 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	TLE2	Q04725	743 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	MBTD1	Q05BQ5	628 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	MGAT3	Q09327	533 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	STRN3	Q13033	797 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	BFSP2	Q13515	415 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	MAPK6	Q16659	721 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	FAM187B	Q17R55	369 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	KNOP1	Q1ED39	458 aa	Known RBP	13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	LRRC26	Q2I0M4	334 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	TRIM60	Q495X7	471 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	ANO6	Q4KMQ2	910 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	FAM26D	Q5JW98	314 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	TAS1R3	Q7RTX0	852 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	MAP4K3	Q8IVH8	894 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	ACCS	Q96QU6	501 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	PPP1R16B	Q96T49	567 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	OSMR	Q99650	979 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	NAT10	Q9H0A0	1025 aa	Known RBP	13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	DNAJC25	Q9H1X3	360 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	TSPY26P	Q9H489	355 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	CDHR5	Q9HBB8	845 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	EXOC7	Q9UPT5	735 aa		13.15	□□□□□ -0.3
RACK1-223	ENST00000510199	INO80B-WBP1	J3KQ70	363 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	PITPNM1	O00562	1244 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	CHRNA1	P02708	482 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	CKB	P12277	381 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	DARS	P14868	501 aa	Known RBP	13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	EIF4B	P23588	611 aa	Known RBP	13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	CCNE1	P24864	410 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	ERCC5	P28715	1186 aa	Predicted RBP	13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	HOXD13	P35453	343 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	KCNA1	Q09470	495 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	FAAP100	Q0VG06	881 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	PAK1	Q13153	545 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.14	□□□□□ -0.31	5e-9	■□□□□ 9.5
RACK1-223	ENST00000510199	CENPP	Q6IPU0	288 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	KLHL10	Q6JEL2	608 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	NELFCD	Q8IXH7	590 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	P2RX5	Q93086	422 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	PRIMPOL	Q96LW4	560 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	BPIFA3	Q9BQP9	254 aa		13.14	□□□□□ -0.31
RACK1-223	ENST00000510199	KCTD10	Q9H3F6	313 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms