RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 CXorf38Q8TB03 319 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 DYDC2Q96IM9 177 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 PCDH12Q9NPG4 1184 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 NUMBLQ9Y6R0 609 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 ANKRD62A6NC57 917 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 PRKD3O94806 890 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 CTSWP56202 376 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 ZNF568Q3ZCX4 644 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 ZCRB1Q8TBF4 217 aaKnown RBP9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 RSAD2Q8WXG1 361 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 GFM2Q969S9 779 aaKnown RBP9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 ACAP3Q96P50 834 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 MEGF9Q9H1U4 602 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 VTA1Q9NP79 307 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 KCNG1Q9UIX4 513 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 CTDP1Q9Y5B0 961 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 ADGRL2O95490 1459 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 PLB1Q6P1J6 1458 aa9.26□□□□□ -0.93
TRAPPC11-206ENST00000509857 CHD1O14646 1710 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 PTPRGP23470 1445 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 DAPK1P53355 1430 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 PRG4Q92954 1404 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 KIF14Q15058 1648 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 A0A0A6YYK5 440 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 ARHGAP6O43182 974 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 HGFACQ04756 655 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 TBR1Q16650 682 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 FSCN1Q16658 493 aaKnown RBP9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 RNF151Q2KHN1 245 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 USP30Q70CQ3 517 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 LYSMD2Q8IV50 215 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 SLC41A1Q8IVJ1 513 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 CDYL2Q8N8U2 506 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 PPP1R14CQ8TAE6 165 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 LPPQ93052 612 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 WDR92Q96MX6 357 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 NOL10Q9BSC4 688 aaKnown RBP9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 SOX7Q9BT81 388 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 MSL2Q9HCI7 577 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 MAGEL2Q9UJ55 1249 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 SHANK2Q9UPX8 1470 aa9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
TRAPPC11-206ENST00000509857 ATP10BO94823 1461 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 PCDH8O95206 1070 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 CDK11BP21127 795 aaKnown RBP9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 GPR15P49685 360 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 CDKN1CP49918 316 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 CCDC178Q5BJE1 867 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 SLFN13Q68D06 897 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 COG1Q8WTW3 980 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 CFHR4Q92496 578 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 HIST1H2AHQ96KK5 128 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 ORAI2Q96SN7 254 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 HIST1H2AJQ99878 128 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 SSBP3Q9BWW4 388 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 ANO3Q9BYT9 981 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 OSBPL6Q9BZF3 934 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 PUS7LQ9H0K6 701 aaKnown RBP9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 PPP4R1LQ9P1A2 415 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 SYNPO2Q9UMS6 1093 aa9.24□□□□□ -0.93
TRAPPC11-206ENST00000509857 ABCC10Q5T3U5 1492 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 H2AFYO75367 372 aaKnown RBP9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 ENPP1P22413 925 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 ERVK-21P61565 698 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 PTPROQ16827 1216 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 PITRM1Q5JRX3 1037 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 LMBR1Q8WVP7 490 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 RBM15Q96T37 977 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 JADE2Q9NQC1 790 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 NR2E1Q9Y466 385 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 ADGBQ8N7X0 1667 aa9.23□□□□□ -0.93
TRAPPC11-206ENST00000509857 ABCC5O15440 1437 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 UHRF1BP1LA0JNW5 1464 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 MATN2O00339 956 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 SEC24DO94855 1032 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 ITGB3P05106 788 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 CLEC2LP0C7M8 214 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 RAC3P60763 192 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 ADAM15Q13444 863 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 CCDC62Q6P9F0 684 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 CLEC14AQ86T13 490 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 PRPF38AQ8NAV1 312 aaKnown RBP9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 AHCYL2Q96HN2 611 aaKnown RBP9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 MENTQ9BUN1 341 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 SLC5A4Q9NY91 659 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 DNAI1Q9UI46 699 aa9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 CNOT11Q9UKZ1 510 aaKnown RBP9.22□□□□□ -0.93
TRAPPC11-206ENST00000509857 CAMSAP2Q08AD1 1489 aa9.21□□□□□ -0.93
TRAPPC11-206ENST00000509857 ARHGEF5Q12774 1597 aa9.21□□□□□ -0.93
TRAPPC11-206ENST00000509857 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
TRAPPC11-206ENST00000509857 PMS2P1A4D2B8 440 aa9.21□□□□□ -0.94
TRAPPC11-206ENST00000509857 CELA3BP08861 270 aa9.21□□□□□ -0.94
TRAPPC11-206ENST00000509857 MAN2A1Q16706 1144 aa9.21□□□□□ -0.94
TRAPPC11-206ENST00000509857 NEIL1Q96FI4 390 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC11-206ENST00000509857 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms