RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 LAMA1P25391 3075 aa11.08□□□□□ -0.64
PTPN20-221ENST00000509599 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 ORC4O43929 436 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 KCNK5O95279 499 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 SPINK2P20155 84 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 MAGEA9P43362 315 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 GPC5P78333 572 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 TMEM173Q86WV6 379 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 CYP4X1Q8N118 509 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 CELF5Q8N6W0 485 aaKnown RBP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 TMEM40Q8WWA1 233 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 CLDN23Q96B33 292 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
PTPN20-221ENST00000509599 LTB4R2Q9NPC1 389 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 PCDHA1Q9Y5I3 950 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 CLUHO75153 1309 aa11.07□□□□□ -0.64
PTPN20-221ENST00000509599 ZBTB24O43167 697 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 FGRP09769 529 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 CTSAP10619 480 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 LAMP2P13473 410 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 INSRRP14616 1297 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 CD72P21854 359 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 TCF7P36402 384 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 CLCN4P51793 760 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 KRT76Q01546 638 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 BMS1Q14692 1282 aaKnown RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 MLF2Q15773 248 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 CCDC6Q16204 474 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 INPP4AQ96PE3 977 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-221ENST00000509599 RXFP3Q9NSD7 469 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 ERAP1Q9NZ08 941 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 NUMBLQ9Y6R0 609 aa11.06□□□□□ -0.64
PTPN20-221ENST00000509599 RPS6KA5O75582 802 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 PRKCQQ04759 706 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 GIT2Q14161 759 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 DSC3Q14574 896 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-221ENST00000509599 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 STAMQ92783 540 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 ANAPC4Q9UJX5 808 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 LAMA5O15230 3695 aa11.05□□□□□ -0.64
PTPN20-221ENST00000509599 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 RRN3P2A6NIE6 340 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 HOXA2O43364 376 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 FIBPO43427 364 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 TOP3BO95985 862 aaKnown RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 RLBP1P12271 317 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 TARSP26639 723 aaKnown RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 BCAR1P56945 870 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 MTAPQ13126 283 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 FZD5Q13467 585 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 SLC44A4Q53GD3 710 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 ZBTB41Q5SVQ8 909 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 FAM43BQ6ZT52 329 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 BCL7CQ8WUZ0 217 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 LSM14BQ9BX40 385 aaKnown RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 VN1R3Q9BXE9 311 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 RHOBTB2Q9BYZ6 727 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 JMJD4Q9H9V9 463 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 TOR4AQ9NXH8 423 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
PTPN20-221ENST00000509599 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
PTPN20-221ENST00000509599 TENM4Q6N022 2769 aa11.03□□□□□ -0.64
PTPN20-221ENST00000509599 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
PTPN20-221ENST00000509599 PPP1R11O60927 126 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 CNPP09543 421 aaKnown RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 SF3A2Q15428 464 aaKnown RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 STPG1Q5TH74 334 aa11.03□□□□□ -0.64
PTPN20-221ENST00000509599 DDX53Q86TM3 631 aaKnown RBP11.03□□□□□ -0.64
PTPN20-221ENST00000509599 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms