RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 DDX42Q86XP3 938 aaKnown RBP eCLIP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 CCDC13Q8IYE1 715 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 CCT6BQ92526 530 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ZBTB9Q96C00 473 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 SEC16BQ96JE7 1060 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 AGPAT1Q99943 283 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 TIPINQ9BVW5 301 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 SERPINA10Q9UK55 444 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 IGSF9BQ9UPX0 1349 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 E7EVH7 732 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 CHUKO15111 745 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ICA1Q05084 483 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 DHX9Q08211 1270 aaKnown RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 IFFO1Q0D2I5 559 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 NFIAQ12857 509 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 BFSP1Q12934 665 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 WLSQ5T9L3 541 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 STRIP1Q5VSL9 837 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ATXN2LQ8WWM7 1075 aaKnown RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 XPO6Q96QU8 1125 aaKnown RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 NCAPGQ9BPX3 1015 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ROPN1BQ9BZX4 212 aaPredicted RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ZC3H12CQ9C0D7 883 aaKnown RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 WNT8AQ9H1J5 351 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ADAM7Q9H2U9 754 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ROPN1Q9HAT0 212 aaPredicted RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 TMCO5BA8MYB1 307 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 BMP3P12645 472 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 ADCY2Q08462 1091 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 CBWD6Q4V339 395 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 CBWD3Q5JTY5 395 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 CBWD5Q5RIA9 395 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 INTS8Q75QN2 995 aaKnown RBP9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 CCDC91Q7Z6B0 441 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 JAMLQ86YT9 394 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 GLYCTKQ8IVS8 523 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 RIT2Q99578 217 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 ZSWIM1Q9BR11 485 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 WDR18Q9BV38 432 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 FRMD4BQ9Y2L6 1034 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 GOLGA6L7A0A1B0GV03 622 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 MEIS1O00470 390 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 TCEA3O75764 348 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 VIL1P09327 827 aaKnown RBP9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 MYL7Q01449 175 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 SLMAPQ14BN4 828 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 FBXW10Q5XX13 1052 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 GJB7Q6PEY0 223 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 CACNA2D3Q8IZS8 1091 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 ARHGEF26Q96DR7 871 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 CHMP6Q96FZ7 201 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 STMN4Q9H169 189 aaPredicted RBP9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 RANBP17Q9H2T7 1088 aaKnown RBP9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 GOLPH3Q9H4A6 298 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 TMEM206Q9H813 350 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 EHMT1Q9H9B1 1298 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 OSGEPQ9NPF4 335 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 DBR1Q9UK59 544 aaKnown RBP9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 COG5Q9UP83 839 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 RPTORQ8N122 1335 aa9.98□□□□□ -0.81
PDGFRA-208ENST00000509490 F8W031 263 aaPredicted RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 RTN2O75298 545 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 CYP1A2P05177 515 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 POLD1P28340 1107 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 ALDH1B1P30837 517 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 PMS2P54278 862 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 MAGOHP61326 146 aaKnown RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 KCNA1Q09470 495 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 GKAP1Q5VSY0 366 aaPredicted RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 CCDC121Q6ZUS5 278 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 ZFPM1Q8IX07 1006 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 UBLCP1Q8WVY7 318 aaPredicted RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 ALG3Q92685 438 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 ART4Q93070 314 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 MAGOHBQ96A72 148 aaKnown RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 NOVA2Q9UNW9 492 aaKnown RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 NR2E1Q9Y466 385 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 DDTLA6NHG4 134 aaPredicted RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 MPHOSPH10O00566 681 aaKnown RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 C21orf2O43822 256 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 RARGP13631 454 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 TNFAIP3P21580 790 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 SIX1Q15475 284 aaPredicted RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 KRT71Q3SY84 523 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 PHLDB3Q6NSJ2 640 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 SYDE1Q6ZW31 735 aaPredicted RBP9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 UBL4BQ8N7F7 174 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 PRELID2Q8N945 189 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 OR2W6PQ8NHA6 318 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 KCNN1Q92952 543 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 ZHX3Q9H4I2 956 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 LRRC19Q9H756 370 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 KLC4Q9NSK0 619 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 ALG6Q9Y672 507 aa9.97□□□□□ -0.81
PDGFRA-208ENST00000509490 MYH11P35749 1972 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms