RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TRAIPQ9BWF2 469 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 ELAC1Q9H777 363 aaKnown RBP20.17■□□□□ 0.82
CLDND1-220ENST00000508902 PRDM6Q9NQX0 595 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 BLOC1S4Q9NUP1 217 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 USP20Q9Y2K6 914 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 ZDHHC9Q9Y397 364 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 A0A0U1RQF3 1178 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 POU3F3P20264 500 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-220ENST00000508902 PHKA2P46019 1235 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 NASPP49321 788 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-220ENST00000508902 SLC12A3P55017 1021 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 POU5F1BQ06416 359 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 BTG3Q14201 252 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-220ENST00000508902 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
CLDND1-220ENST00000508902 RINT1Q6NUQ1 792 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 C1orf186Q6ZWK4 172 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 CABP7Q86V35 215 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 FIBCD1Q8N539 461 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 MCPH1Q8NEM0 835 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 LPPQ93052 612 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 CPB2Q96IY4 423 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 CHAMP1Q96JM3 812 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 CASD1Q96PB1 797 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 GAS2L1Q99501 681 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-220ENST00000508902 NFKBIZQ9BYH8 718 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 CSRNP2Q9H175 543 aa20.16■□□□□ 0.82
CLDND1-220ENST00000508902 BMP15O95972 392 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 STAG3L1P0CL83 205 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 IGFBP4P22692 258 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 KARSQ15046 597 aaKnown RBP20.15■□□□□ 0.82
CLDND1-220ENST00000508902 LONRF3Q496Y0 759 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 FBXO22Q8NEZ5 403 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 EPSTI1Q96J88 318 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 EIF2AQ9BY44 585 aaKnown RBP20.15■□□□□ 0.82
CLDND1-220ENST00000508902 INO80BQ9C086 356 aaPredicted RBP20.15■□□□□ 0.82
CLDND1-220ENST00000508902 CCDC113Q9H0I3 377 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 ZSCAN16Q9H4T2 348 aaPredicted RBP20.15■□□□□ 0.82
CLDND1-220ENST00000508902 CWH43Q9H720 699 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 CHST12Q9NRB3 414 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 PCDHB7Q9Y5E2 793 aa20.15■□□□□ 0.82
CLDND1-220ENST00000508902 MORC2Q9Y6X9 1032 aaPredicted RBP20.15■□□□□ 0.82
CLDND1-220ENST00000508902 TBKBP1A7MCY6 615 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 C5orf67F2Z3F1 127 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 B4GALT3O60512 393 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 F13A1P00488 732 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 ZSCAN22P10073 491 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 ZSCAN20P17040 1043 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 ARF4P18085 180 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 PLCG1P19174 1290 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 AFF1P51825 1210 aaKnown RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 ARSHQ5FYA8 562 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 FAM43BQ6ZT52 329 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 CDR2LQ86X02 465 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 AK8Q96MA6 479 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 FAM105AQ9NUU6 356 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 LRFN2Q9ULH4 789 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 DNM3Q9UQ16 869 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 SRPRBQ9Y5M8 271 aaKnown RBP20.14■□□□□ 0.81
CLDND1-220ENST00000508902 STK24Q9Y6E0 443 aa20.14■□□□□ 0.81
CLDND1-220ENST00000508902 A0A087X0B3 334 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 NPHP3-ACAD11A0A0J9YXS1 232 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 LRRIQ4A6NIV6 560 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 INO80B-WBP1J3KQ70 363 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 HIP1RO75146 1068 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 CTNNB1P35222 781 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 LONP1P36776 959 aaKnown RBP20.13■□□□□ 0.81
CLDND1-220ENST00000508902 BMPR1AP36894 532 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 CAMK1Q14012 370 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 SLC39A14Q15043 492 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 TWF2Q6IBS0 349 aaKnown RBP20.13■□□□□ 0.81
CLDND1-220ENST00000508902 SYT2Q8N9I0 419 aaPredicted RBP20.13■□□□□ 0.81
CLDND1-220ENST00000508902 RNF169Q8NCN4 708 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 LINC00301Q8NCQ3 95 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 SMG8Q8ND04 991 aaKnown RBP20.13■□□□□ 0.81
CLDND1-220ENST00000508902 HELQQ8TDG4 1101 aa20.13■□□□□ 0.81
CLDND1-220ENST00000508902 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
CLDND1-220ENST00000508902 TCHHQ07283 1943 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 H3BNC9 293 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 GRM6O15303 877 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 PLA2G4BP0C869 781 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 DNAJB1P25685 340 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
CLDND1-220ENST00000508902 TFDP1Q14186 410 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 CCDC85BQ15834 202 aaPredicted RBP20.12■□□□□ 0.81
CLDND1-220ENST00000508902 FOXD4L6Q3SYB3 417 aaPredicted RBP20.12■□□□□ 0.81
CLDND1-220ENST00000508902 FOXD4L3Q6VB84 417 aaPredicted RBP20.12■□□□□ 0.81
CLDND1-220ENST00000508902 AGMOQ6ZNB7 445 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 TAS1R3Q7RTX0 852 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 SYMPKQ92797 1274 aaKnown RBP20.12■□□□□ 0.81
CLDND1-220ENST00000508902 CCSER1Q9C0I3 900 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 TMEM117Q9H0C3 514 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 RNF39Q9H2S5 420 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 FZD8Q9H461 694 aa20.12■□□□□ 0.81
CLDND1-220ENST00000508902 TYW1Q9NV66 732 aaKnown RBP20.12■□□□□ 0.81
CLDND1-220ENST00000508902 ZNF623O75123 536 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 PBX3P40426 434 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 NAMPTP43490 491 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 RAD51AP2Q09MP3 1159 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 GPM6BQ13491 265 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 NAALADL2Q58DX5 795 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms