RNA–Protein interactions for RNA: ENST00000508735.5

SNHG4-206, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 310 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-206ENST00000508735 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 LXNQ9BS40 222 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
SNHG4-206ENST00000508735 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
SNHG4-206ENST00000508735 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
SNHG4-206ENST00000508735 TECTAO75443 2155 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 M0R296 226 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 TBX3O15119 743 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 B4GALT3O60512 393 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.221e-323■■■■■ 141.5
SNHG4-206ENST00000508735 CLASP2O75122 1294 aaKnown RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 ZNF623O75123 536 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 OFD1O75665 1012 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 CXCL14O95715 111 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 SKIP12755 728 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 XBP1P17861 261 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 CA8P35219 290 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 RAB27AP51159 221 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 AK2P54819 239 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 NR5A1Q13285 461 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 EPHA7Q15375 998 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 VPS52Q8N1B4 723 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 CASP10Q92851 521 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-206ENST00000508735 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
SNHG4-206ENST00000508735 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 MARCH6O60337 910 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 LARGE1O95461 756 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 GALTP07902 379 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
SNHG4-206ENST00000508735 NHLH1Q02575 133 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 CTTNQ14247 550 aaKnown RBP13.65□□□□□ -0.22
SNHG4-206ENST00000508735 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SNHG4-206ENST00000508735 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
SNHG4-206ENST00000508735 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
SNHG4-206ENST00000508735 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
SNHG4-206ENST00000508735 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
SNHG4-206ENST00000508735 KRT2P35908 639 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 RFC5P40937 340 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 SLC11A1P49279 550 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 AFF1P51825 1210 aaKnown RBP13.64□□□□□ -0.23
SNHG4-206ENST00000508735 ANAPC15P60006 121 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
SNHG4-206ENST00000508735 EMC2Q15006 297 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 ME3Q16798 604 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
SNHG4-206ENST00000508735 EXOC8Q8IYI6 725 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
SNHG4-206ENST00000508735 RSPH1Q8WYR4 309 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
SNHG4-206ENST00000508735 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 ZNF318Q5VUA4 2279 aa13.64□□□□□ -0.23
SNHG4-206ENST00000508735 WNT7AO00755 349 aa13.63□□□□□ -0.23
SNHG4-206ENST00000508735 DDHD2O94830 711 aa13.63□□□□□ -0.23
SNHG4-206ENST00000508735 SLITRK3O94933 977 aa13.63□□□□□ -0.23
SNHG4-206ENST00000508735 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
SNHG4-206ENST00000508735 WEE2P0C1S8 567 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms