RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ARHGAP28Q9P2N2 729 aa11.44□□□□□ -0.58
PTPN20-220ENST00000508715 ODF2LQ9ULJ1 636 aa11.44□□□□□ -0.58
PTPN20-220ENST00000508715 ANK1P16157 1881 aa11.44□□□□□ -0.58
PTPN20-220ENST00000508715 LAMA2P24043 3122 aaKnown RBP11.44□□□□□ -0.58
PTPN20-220ENST00000508715 CITO14578 2027 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 B4GALT5O43286 388 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 RPS6KA5O75582 802 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 PARNO95453 639 aaKnown RBP11.43□□□□□ -0.58
PTPN20-220ENST00000508715 PLS3P13797 630 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 NMT1P30419 496 aaKnown RBP11.43□□□□□ -0.58
PTPN20-220ENST00000508715 NAMPTP43490 491 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 DPYDQ12882 1025 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 PPIGQ13427 754 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPN20-220ENST00000508715 SHHQ15465 462 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 SRGAP1Q7Z6B7 1085 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 SFR1Q86XK3 245 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 TMEM161BQ8NDZ6 487 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 SPIRE2Q8WWL2 714 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
PTPN20-220ENST00000508715 KCNN1Q92952 543 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 DRC1Q96MC2 740 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 STRA6Q9BX79 667 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 IFIH1Q9BYX4 1025 aaKnown RBP11.43□□□□□ -0.58
PTPN20-220ENST00000508715 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 FZD8Q9H461 694 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 MAGEF1Q9HAY2 307 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 USP25Q9UHP3 1055 aa11.43□□□□□ -0.58
PTPN20-220ENST00000508715 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 LRRIQ4A6NIV6 560 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 M0QZ92 97 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 SLC16A4O15374 487 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 TSPAN1O60635 241 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 PPP1R37O75864 691 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 BMP8BP34820 402 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 CASP5P51878 434 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 NCKAP1LP55160 1127 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 CDC42EP1Q00587 391 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 CSPP1Q1MSJ5 1256 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 CNKSR3Q6P9H4 555 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPN20-220ENST00000508715 OTOP2Q7RTS6 562 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 HERVK_113Q902F9 699 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
PTPN20-220ENST00000508715 PYM1Q9BRP8 204 aaKnown RBP11.42□□□□□ -0.58
PTPN20-220ENST00000508715 GCOM2Q9BZD3 368 aaPredicted RBP11.42□□□□□ -0.58
PTPN20-220ENST00000508715 C17orf75Q9HAS0 396 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 DACT1Q9NYF0 836 aa11.42□□□□□ -0.58
PTPN20-220ENST00000508715 PDCD11Q14690 1871 aaKnown RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 CCDC169A6NNP5 214 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 ENPP3O14638 875 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 ABLIM1O14639 778 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 TRAK2O60296 914 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 FAM13AO94988 1023 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 MAPTP10636 758 aaKnown RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 ARF4P18085 180 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 MCM4P33991 863 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 HOXD13P35453 343 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 PHKA2P46019 1235 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 DEFB103AP81534 67 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 KCNA1Q09470 495 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 NFX1Q12986 1120 aaKnown RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 COASYQ13057 564 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 PAK2Q13177 524 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 PNOCQ13519 176 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 TFDP1Q14186 410 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 PPP2R5AQ15172 486 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 FAM187BQ17R55 369 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 ZC2HC1CQ53FD0 456 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 ODR4Q5SWX8 454 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 UBXN11Q5T124 520 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 NT5DC1Q5TFE4 455 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 FAM109BQ6ICB4 259 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 ZNF720Q7Z2F6 126 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 HAUS6Q7Z4H7 955 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 TMCO2Q7Z6W1 182 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 CDR2LQ86X02 465 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 CEP57L1Q8IYX8 460 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 RPUSD2Q8IZ73 545 aaKnown RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 MYCT1Q8N699 235 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 USP38Q8NB14 1042 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 SPATA20Q8TB22 786 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 GBP4Q96PP9 640 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-220ENST00000508715 KMT5AQ9NQR1 393 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 PANK4Q9NVE7 773 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 TBC1D7Q9P0N9 293 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 KIAA1671Q9BY89 1806 aa11.41□□□□□ -0.58
PTPN20-220ENST00000508715 C9IYK1 514 aa11.4□□□□□ -0.58
PTPN20-220ENST00000508715 INO80B-WBP1J3KQ70 363 aa11.4□□□□□ -0.58
PTPN20-220ENST00000508715 FGBP02675 491 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms