RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 C6P13671 934 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 ACRV1P26436 265 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 KIR2DL3P43628 341 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 ID4P47928 161 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 MAN2A1Q16706 1144 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 ATP13A4Q4VNC1 1196 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 LYSMD2Q8IV50 215 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 PIK3C3Q8NEB9 887 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 USP7Q93009 1102 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 FDXACB1Q9BRP7 624 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 CAPN14A8MX76 684 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 FSBPO95073 299 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 HHEXQ03014 270 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 NRN1LQ496H8 165 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 KRT40Q6A162 431 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 FRMD7Q6ZUT3 714 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 STRA8Q7Z7C7 330 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 SGMS1Q86VZ5 419 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 UNC5BQ8IZJ1 945 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 UBR7Q8N806 425 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 IL17DQ8TAD2 202 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 USP18Q9UMW8 372 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 NUMBLQ9Y6R0 609 aa7.52□□□□□ -1.21
TOPBP1-206ENST00000508524 CD69Q07108 199 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 MIIPQ5JXC2 388 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 FAM111BQ6SJ93 734 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 RASSF3Q86WH2 238 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 SLC41A1Q8IVJ1 513 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 ZNF503Q96F45 646 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 UIMC1Q96RL1 719 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 TCF25Q9BQ70 676 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 ANO3Q9BYT9 981 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 PRDM12Q9H4Q4 367 aa7.51□□□□□ -1.21
TOPBP1-206ENST00000508524 ZEB2O60315 1214 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 LY86O95711 162 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 CLEC2LP0C7M8 214 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 MASP1P48740 699 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 GPR15P49685 360 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 STRN3Q13033 797 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 FOXE3Q13461 319 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 CMTM4Q8IZR5 234 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 GAB3Q8WWW8 586 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 TTC1Q99614 292 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 WNT8AQ9H1J5 351 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 CAAP1Q9H8G2 361 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 ING3Q9NXR8 418 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 RCAN3Q9UKA8 241 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 GIT1Q9Y2X7 761 aa7.5□□□□□ -1.21
TOPBP1-206ENST00000508524 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 RAB11FIP3O75154 756 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 PPARAQ07869 468 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 TRIM25Q14258 630 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 PDCD1Q15116 288 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 CCDC178Q5BJE1 867 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 C1orf210Q8IVY1 113 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 ANKRD35Q8N283 1001 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 AFAP1L2Q8N4X5 818 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 CLRN3Q8NCR9 226 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 TOPORSQ9NS56 1045 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 PRSS50Q9UI38 385 aa7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 NOC2LQ9Y3T9 749 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-206ENST00000508524 CYP27B1O15528 508 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 AKAP8O43823 692 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 ALDH1A2O94788 518 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 SOX5P35711 763 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 SPIDRQ14159 915 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 ELAVL1Q15717 326 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 PITRM1Q5JRX3 1037 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 CCDC62Q6P9F0 684 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 Q6ZRM9 215 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 MIEF2Q96C03 454 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 ENKD1Q9H0I2 346 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 NCDNQ9UBB6 729 aa7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 EVLQ9UI08 416 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 APOBEC2Q9Y235 224 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-206ENST00000508524 NISCHQ9Y2I1 1504 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 A0A1W2PR48 441 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 C1SP09871 688 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 DGCR2P98153 550 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 RRP1BQ14684 758 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 FKBP15Q5T1M5 1219 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 HDGFL2Q7Z4V5 671 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 THEMISQ8N1K5 641 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 SLC16A11Q8NCK7 471 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 CACTINQ8WUQ7 758 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 CHAC2Q8WUX2 184 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 RSAD2Q8WXG1 361 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 AURKAIP1Q9NWT8 199 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 CEP72Q9P209 647 aa7.47□□□□□ -1.21
TOPBP1-206ENST00000508524 NRP2O60462 931 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 ULK1O75385 1050 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 STC2O76061 302 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 FSHBP01225 129 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms